DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hec and Pth1r

DIOPT Version :9

Sequence 1:NP_001285174.1 Gene:hec / 32246 FlyBaseID:FBgn0030437 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_036010598.1 Gene:Pth1r / 19228 MGIID:97801 Length:745 Species:Mus musculus


Alignment Length:471 Identity:135/471 - (28%)
Similarity:220/471 - (46%) Gaps:68/471 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 RIFLKH-LYAECVFRYQNVTYDTDDP---SFSLGPATDYDSD---LPENFSPVPRYLENAAMNEG 83
            :|||.| ..|:|....:.|.:....|   :..:.||...:||   .|.:.|..||          
Mouse   179 QIFLLHRAQAQCDKLLKEVLHTAAQPMARTTPISPANIMESDKGWTPASTSGKPR---------- 233

  Fly    84 VIDMRNVDEELAEKEELMATVVSATMATNQKENRLFCPLNFDGYLCWPRTPAGTVLSQYCPDFVE 148
                    :|.|..:....:..:..:.|..:.....|...:|..:|||....|.|::..|||::.
Mouse   234 --------KEKAPGKFYPESKENKDVPTGSRRRGRPCLPEWDNIVCWPLGAPGEVVAVPCPDYIY 290

  Fly   149 GFNRKFLAHKTCLENGSWYRHPVSNQTWSNYTNCVDYEDLEFRQ-----FINELYVKGYALSLLA 208
            .||.|..|::.|..||||...|..|:||:||:.|:.:...|.|:     .:..:|..||::||.:
Mouse   291 DFNHKGHAYRRCDRNGSWEVVPGHNRTWANYSECLKFMTNETREREVFDRLGMIYTVGYSMSLAS 355

  Fly   209 LLISIIIFLGFKSLRCTRIRIHVHLFASLACTCVA-----WILWYRLVVERSETIAENPLWCI-- 266
            |.::::|...|:.|.|||..||:|:|.|......:     .:|:....::.:|.:.|..|..|  
Mouse   356 LTVAVLILAYFRRLHCTRNYIHMHMFLSFMLRAASIFVKDAVLYSGFTLDEAERLTEEELHIIAQ 420

  Fly   267 -------------GLHLVVH---YFMLVNYFWMFCEGLHLHLVLVVVFVKDTIVMRWFIVISWFS 315
                         |..:.|.   ||:..||:|:..|||:||.::.:.|..:...:..|.:..|..
Mouse   421 VPPPPAAAAVGYAGCRVAVTFFLYFLATNYYWILVEGLYLHSLIFMAFFSEKKYLWGFTIFGWGL 485

  Fly   316 P-IPIAIVYGLARHFSSPDNKHCW-ITDSLYLWIFSVPITLSLLASFIFLINVLRVIVRKLHPQS 378
            | :.:|:..|:....:   |..|| ::.....||..|||..|::.:||..||::||:..||...:
Mouse   486 PAVFVAVWVGVRATLA---NTGCWDLSSGHKKWIIQVPILASVVLNFILFINIIRVLATKLRETN 547

  Fly   379 AQPAPL--AIRKAVRATIILVPLFGLQH---FLLPYRPDAGT--QLDHFYQMLSVVLVSLQGFVV 436
            |.....  ..||.:|:|::||||||:.:   ..|||...:||  |:...|:||   ..|.|||.|
Mouse   548 AGRCDTRQQYRKLLRSTLVLVPLFGVHYTVFMALPYTEVSGTLWQIQMHYEML---FNSFQGFFV 609

  Fly   437 SFLFCFANHDVTFAIR 452
            :.::||.|.:|...||
Mouse   610 AIIYCFCNGEVQAEIR 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hecNP_001285174.1 HRM 118..185 CDD:280888 26/66 (39%)
7tm_4 216..436 CDD:304433 74/251 (29%)
Pth1rXP_036010598.1 PHA03247 <6..113 CDD:223021
HRM 259..324 CDD:397086 25/64 (39%)
7tm_GPCRs 338..630 CDD:421689 88/294 (30%)
TM helix 1 340..365 CDD:410628 7/24 (29%)
TM helix 2 374..396 CDD:410628 5/21 (24%)
TM helix 3 436..463 CDD:410628 11/26 (42%)
TM helix 4 475..495 CDD:410628 4/19 (21%)
TM helix 5 510..539 CDD:410628 11/28 (39%)
TM helix 6 556..583 CDD:410628 11/26 (42%)
TM helix 7 592..617 CDD:410628 11/27 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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