DRSC/TRiP Functional Genomics Resources

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Protein Alignment hec and seb-3

DIOPT Version :9

Sequence 1:NP_001285174.1 Gene:hec / 32246 FlyBaseID:FBgn0030437 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_510496.1 Gene:seb-3 / 181598 WormBaseID:WBGene00007664 Length:454 Species:Caenorhabditis elegans


Alignment Length:416 Identity:98/416 - (23%)
Similarity:182/416 - (43%) Gaps:85/416 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 MATVVSATMATNQK----ENRLF----CPLNFDGYLCWPRTPAGTVLSQYCPDFV--------EG 149
            |.:::.|..|..|:    ||..:    |.::||..|||.....|..:::.|| |.        |.
 Worm     1 MTSIIRAEYAACQELKKLENSSYNPGGCSVDFDKSLCWASAHIGQQMTRDCP-FTFCTAIPGCEE 64

  Fly   150 FNRKFLAHKTCLENGSWYRHPVSNQTWSNYTNCVDYEDLEFRQFINELYVKGYA----------- 203
            ...:::..:.|...|.|..        ||||.|:...: |:.|.:     :|:.           
 Worm    65 IKDRYMVSRNCNSMGVWQD--------SNYTMCIKVVE-EYAQCL-----QGFCRVCPDVLRDLV 115

  Fly   204 ---------LSLLALLISIIIFLGFKSLRCTRIRIHVHLFASLACTCVAWILWYRLVVERSET-- 257
                     :|::.|:.:|::|..|.|::|.|:.||.:|..:.........:|  .:|:.:..  
 Worm   116 ISVSLTLSFVSVILLVAAIVLFSIFDSIQCRRLSIHKNLATAFVFRFAVLAIW--TIVQTTNVFQ 178

  Fly   258 ----IAENPLW-----CIGLHLVVHYFMLVNYFWMFCEGLHLHLVLVVVFVKDTIVMR-----W- 307
                :...|||     |..:...|.||.:.:..||..||..|:....|      ..||     | 
 Worm   179 DCTRLTPLPLWDYEWICKAILWFVIYFNVASVMWMLIEGAFLYSRFTV------FAMRHSDAPWS 237

  Fly   308 -FIVISWFSPIPIAIVYGLARHF--SSPDNKHCWI--TDSLYLWIFSVPITLSLLASFIFLINVL 367
             ::...|..|..:...:.|...:  |...|..||:  ...|:|||.:..:..:|:.:.|||:.::
 Worm   238 LYLACGWGVPFVVVTAWALVHQYISSQQTNSFCWLPYAQGLHLWILAGTMGSALIMNLIFLLMIV 302

  Fly   368 RVIVRKLHPQSAQPAPLAIRKAVRATIILVPLFGLQHFLLPYRPDAGTQLDHFYQMLSVVLVSLQ 432
            .::|:||..:::..:. .|.:.::||::||||.|:.:..|.|.|:..:.:   |.:.|.:|...|
 Worm   303 VILVQKLRTENSAESK-KIWRTIKATLLLVPLLGISNIPLFYEPEHPSSV---YMLGSAILQHSQ 363

  Fly   433 GFVVSFLFCFANHDVTFAIRTLLNKL 458
            |..::.|:||.|.::..|::..|:|:
 Worm   364 GIFIAVLYCFLNSEIQGALKRQLSKV 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hecNP_001285174.1 HRM 118..185 CDD:280888 19/78 (24%)
7tm_4 216..436 CDD:304433 60/241 (25%)
seb-3NP_510496.1 HRM 27..90 CDD:280888 18/71 (25%)
7tm_4 125..367 CDD:304433 63/253 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5470
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.760

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