DRSC/TRiP Functional Genomics Resources

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Protein Alignment hec and pdfr-1

DIOPT Version :9

Sequence 1:NP_001285174.1 Gene:hec / 32246 FlyBaseID:FBgn0030437 Length:486 Species:Drosophila melanogaster
Sequence 2:NP_001021170.1 Gene:pdfr-1 / 175942 WormBaseID:WBGene00015735 Length:546 Species:Caenorhabditis elegans


Alignment Length:408 Identity:102/408 - (25%)
Similarity:173/408 - (42%) Gaps:89/408 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 ENRLFCPLNFDGYLCWPRTPAGTVLSQYCPDFVEGFNRKFLAHKTCLENGSWYRHPVSNQ----- 174
            :.|::|...:|..||||.|||.:.::..|| .::|.:......|.|..:|.|........     
 Worm    69 DTRIWCNATYDTVLCWPPTPANSSVTLQCP-HMKGLDPNKNITKDCHVSGVWSGRNAGEMGPTLP 132

  Fly   175 TWSNYTNCVDYEDLEFRQFIN---------------ELYVKGYALSLLALLISIIIFLGFKSLRC 224
            .|:|:|.|...|.:...|.:|               :|...|..|||::|:::|.||..|:.||.
 Worm   133 GWTNFTMCYTDEVIYIMQNLNNESLTIAQEVARNARKLEFVGLGLSLVSLILAISIFSYFRRLRV 197

  Fly   225 TRIRIHVHL-FASLACTCVAWILWYRLVV----------ERSETIAENPLWCIGLHLVVHYFMLV 278
            .|..:|:|| .|.|....:..:|:..|:.          ...:||...|:.|.|:...:.||..|
 Worm   198 FRNLLHLHLMIAMLMVVILRLVLYIDLIFTGENGPHTNSAEGKTINTMPIVCEGMFFFLEYFKTV 262

  Fly   279 NYFWMFCEGLHLHLVLVVVFVKDTIVMRWFIVISWFSPIPIAIVYGLARHFSSPDNKHCWI---- 339
            .:.|||.||::|:..               ||..:|:..|..:.|.:|.:.....:...|:    
 Worm   263 TFCWMFLEGIYLNNQ---------------IVFGFFNSEPKLLPYFIAGYGIPLVHTMLWLLVVL 312

  Fly   340 ----------TDSLYL----WIFSVPITLSLLASFIFLINVLRVIVRKLHPQSAQPAPLAIRKAV 390
                      ..|.||    ||...|....|:.:..|:.||:||:..|:. :|...:...::|:|
 Worm   313 IKKDFKVERCLGSYYLEPEFWILDGPRMAELVINLFFICNVIRVLYSKVR-ESNNTSEAGLKKSV 376

  Fly   391 RATIILVPLFGLQHFL--LPYRPD--------AGTQLDHFYQMLSVVLVSLQGFVVSFLFCFANH 445
            :|.::|:||.|:.:.:  :|:.|.        ..|....|..|       .||.:|:.::||.|.
 Worm   377 KAAMMLLPLLGVPNIMQTIPFAPTRDNIMVFAVWTYTASFTYM-------YQGLMVASIYCFTNK 434

  Fly   446 DVTFAIRT------LLNK 457
            :|...::|      ||:|
 Worm   435 EVNHVLKTFYARYRLLHK 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hecNP_001285174.1 HRM 118..185 CDD:280888 20/71 (28%)
7tm_4 216..436 CDD:304433 61/258 (24%)
pdfr-1NP_001021170.1 HRM 74..143 CDD:280888 20/69 (29%)
7tm_2 164..425 CDD:278432 69/283 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001436
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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