DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hec and Gcgr

DIOPT Version :9

Sequence 1:NP_001285174.1 Gene:hec / 32246 FlyBaseID:FBgn0030437 Length:486 Species:Drosophila melanogaster
Sequence 2:XP_017169752.1 Gene:Gcgr / 14527 MGIID:99572 Length:497 Species:Mus musculus


Alignment Length:353 Identity:103/353 - (29%)
Similarity:170/353 - (48%) Gaps:50/353 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 TPAG-TVLSQYCPDFVE-----GFNRKFLAHKTCLENGSWYRHPVSNQTWSNYTNC-VDYEDLEF 190
            |||| |.|....|.|..     |..:..|..|.|..:|.|.|.| ..|.|.|.:.| :|.|::|.
Mouse    80 TPAGLTPLPTPLPTFPAPGTYLGTTKHRLVFKRCGPDGQWVRGP-RGQPWRNASQCQLDDEEIEV 143

  Fly   191 RQFINE-------LYVKGYALSLLALLISIIIFLGFKSLRCTRIRIHVHLFASL-----ACTCVA 243
            ::.:.:       :|..||:|||.|||::::|.||.:.|.|||..||.:||||.     :...:.
Mouse   144 QKGVAKMYSSQQVMYTVGYSLSLGALLLALVILLGLRKLHCTRNYIHGNLFASFVLKAGSVLVID 208

  Fly   244 WILWYRLVVERSETIAEN---PLW--------CIGLHLVVHYFMLVNYFWMFCEGLHLHLVLVVV 297
            |:|..|.    |:.|.::   .:|        |....:::.|.::.||.|:..||::|:.:|.:.
Mouse   209 WLLKTRY----SQKIGDDLSVSVWLSDGAMAGCRVATVIMQYGIIANYCWLLVEGVYLYSLLSLA 269

  Fly   298 FVKDTIVMRWFIVISWFSP----IPIAIVYGLARHFSSPDNKHCWIT-DSL-YLWIFSVPITLSL 356
            ...:......::.|.|.:|    ||..:|..|.      :|..||.: |:: :.||..:|:.|:|
Mouse   270 TFSERSFFSLYLGIGWGAPLLFVIPWVVVKCLF------ENVQCWTSNDNMGFWWILRIPVFLAL 328

  Fly   357 LASFIFLINVLRVIVRKLHPQSAQPAPLAIRKAVRATIILVPLFGLQHFLLPYRPDAGTQ--LDH 419
            |.:|...::::.::|.||.......|....|.| |:|:.|:||.|:...:..:..|...|  |..
Mouse   329 LINFFIFVHIIHLLVAKLRAHQMHYADYKFRLA-RSTLTLIPLLGVHEVVFAFVTDEHAQGTLRS 392

  Fly   420 FYQMLSVVLVSLQGFVVSFLFCFANHDV 447
            ......:.|.|.||.:|:.|:||.|.:|
Mouse   393 TKLFFDLFLSSFQGLLVAVLYCFLNKEV 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hecNP_001285174.1 HRM 118..185 CDD:280888 20/58 (34%)
7tm_4 216..436 CDD:304433 64/243 (26%)
GcgrXP_017169752.1 7tmB1_GCGR 149..429 CDD:320395 80/283 (28%)
TM helix 1 154..178 CDD:320395 10/23 (43%)
TM helix 2 187..208 CDD:320395 6/20 (30%)
TM helix 3 238..260 CDD:320395 5/21 (24%)
TM helix 4 279..295 CDD:320395 4/15 (27%)
TM helix 5 313..336 CDD:320395 7/22 (32%)
TM helix 6 358..383 CDD:320395 8/25 (32%)
TM helix 7 392..417 CDD:320395 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4564
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X66
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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