Protein Alignment fne and elavl3

DIOPT Version :9

• Sequence 1: NP_001096965.1
• Gene: fne / 32245
• FlyBaseID: FBgn0086675
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: XP_012808614.1
• Gene: elavl3 / 594912
• XenbaseID: XB-GENE-490864
• Length: 363
• Species: Xenopus tropicalis
• Alignment Length: 367
• Identity: 211/367 - (57%)
• Similarity: 255/367 - (69%)
• Gaps: 53/367 - (14%)

  Fly    11 GSANGSVDGSNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSGNLVLPASLTAL 75
            |..||: :|:.|:|:||||||||||.|||||.:|||.||||:|||||||||::
 Frog    21 GILNGT-NGAADDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKIT------------ 72

  Fly    76 NPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIKGANLYVSGLPKN 140
                  ||||||||||||...||:||:||||||:||.|.||||||||||.||:.||||||.|||.
 Frog    73 ------GQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSSLPKT 131

  Fly   141 LSQPDLEGMFASFGKIITSRILCDNISG-LSKGVGFIRFDQRNEAERAIQELNGKTPKGYAEPIT 204
            ::|.::|.:|:.:|:|||||||.|.::| :|:||||||||:|.|||.||:.|||:.|.|.:||||
 Frog   132 MNQKEMEQLFSQYGRIITSRILVDQVTGSVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGASEPIT 196

  Fly   205 VKFANNPSNSAKAQIAPPLTAYLTPQAAAATRRLAGAL---------------------PSAGRI 248
            ||||||||....       .|.||.......||..|.|                     |.:...
 Frog   197 VKFANNPSQKTG-------QALLTHLYQTTARRYTGPLHHQTQRFRLDSLINMAYGVKSPLSFLP 254

  Fly   249 RYSPLAGDLLANSILPGNAMTG---SGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQT 310
            |:||:..|.:.|  |.|.::||   :|||||||||:||.:|:||||||||||||.:||||||..|
 Frog   255 RFSPITIDSVTN--LAGVSLTGPTTAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTT 317

  Fly   311 SKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 352
            :||||||||||||||||.:||.|||||.||:|||||||||:|
 Frog   318 NKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 359

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fne	NP_001096965.1	ELAV_HUD_SF	23..354	CDD:273741	206/355 (58%)
elavl3	XP_012808614.1	ELAV_HUD_SF	32..362	CDD:273741	206/355 (58%)
		RRM1_Hu	34..111	CDD:241094	60/94 (64%)
		RRM_SF	116..206	CDD:302621	56/89 (63%)
		RRM3_HuC	279..363	CDD:241099	66/81 (81%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	121	1.000	Domainoid score	I5618
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	414	1.000	Inparanoid score	I1795
OMA	1	1.010	-	-		QHG55893
OrthoDB	1	1.010	-	-		D425303at33208
OrthoFinder	1	1.000	-	-		FOG0000313
OrthoInspector	1	1.000	-	-		mtm9409
Panther	1	1.100	-	-	O	PTHR10352
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R3804
SonicParanoid	1	1.000	-	-		X326
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	11	11.110