Protein Alignment fne and CG34354

DIOPT Version :9

• Sequence 1: NP_001096965.1
• Gene: fne / 32245
• FlyBaseID: FBgn0086675
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Alignment Length: 293
• Identity: 69/293 - (23%)
• Similarity: 126/293 - (43%)
• Gaps: 78/293 - (26%)

  Fly    19 GSNDE-SRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSGNLVLPASLTALNPALQQG 82
            |:|.: .:.::.|..|...:..::::..|:..||:..|::|||        |.:|
  Fly    88 GNNSKPEQFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRD--------PQTL---------- 134

  Fly    83 QSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYAR---PSSESIKGA------NLYVSGLP 138
            :|.|||||::|:..:||.|:..:||..|.::.|:.::|.   |::::...|      .:|....|
  Fly   135 KSKGYGFVSFVKKSEAETAITAMNGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSP 199

  Fly   139 KN---------------LSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAI 188
            .|               |::..|:..|:.:|.|...|:..|      ||..|:||..:..|..||
  Fly   200 TNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAATHAI 258

  Fly   189 QELNGKTPKGYAEPITV---KFANNPSN------SAKAQIAPPLTAYLTPQAAAATRRLAG---- 240
            ..:|.....  .:|:..   |.:.:|::      .|.||..|..:|.....|||..:::||
  Fly   259 VAVNNTEIN--QQPVKCAWGKESGDPNHMSAIAGGALAQGFPFGSAAAAAAAAAYGQQVAGYWYP 321

  Fly   241 ---ALPSAGRIRYSPLAGDLLANSILPGNAMTG 270
               ..|:|     :|      |:::.||..:.|
  Fly   322 PAPTYPAA-----AP------ASALQPGQFLQG 343

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fne	NP_001096965.1	ELAV_HUD_SF	23..354	CDD:273741	67/289 (23%)
CG34354	NP_001097953.2	RRM2_TIA1_like	97..171	CDD:240799	25/91 (27%)
		RRM3_TIA1_like	202..278	CDD:240800	17/83 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910