Protein Alignment fne and CG34354

DIOPT Version :10

• Sequence 1: NP_001401058.1
• Gene: fne / 32245
• FlyBaseID: FBgn0086675
• Length: 371
• Species: Drosophila melanogaster
• Sequence 2: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Alignment Length: 315
• Identity: 75/315 - (23%)
• Similarity: 132/315 - (41%)
• Gaps: 86/315 - (27%)

  Fly    19 GSNDE-SRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSGNLVLPASLTALNPALQQG 82
            |:|.: .:.::.|..|...:..::::..|:..||:..|::|||        |.:|
  Fly    88 GNNSKPEQFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRD--------PQTL---------- 134

  Fly    83 QSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYAR---PSSESIKGA------NLYVSGLP 138
            :|.|||||::|:..:||.|:..:||..|.::.|:.::|.   |::::...|      .:|....|
  Fly   135 KSKGYGFVSFVKKSEAETAITAMNGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSP 199

  Fly   139 KN---------------LSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAI 188
            .|               |::..|:..|:.:|.|...|:..|      ||..|:||..:..|..||
  Fly   200 TNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVFKD------KGYAFVRFSTKEAATHAI 258

  Fly   189 QELNGKTPKGYAEPITV---KFANNPSN------SAKAQIAPPLTAYLTPQAAAATRRLAG---- 240
            ..:|.....  .:|:..   |.:.:|::      .|.||..|..:|.....|||..:::||
  Fly   259 VAVNNTEIN--QQPVKCAWGKESGDPNHMSAIAGGALAQGFPFGSAAAAAAAAAYGQQVAGYWYP 321

  Fly   241 ---ALPSAGRISIGKSPMLAIN-----KGLQ--RYSPLAGDLLANSI-----LPG 280
               ..|:|       :|..|:.     :|:|  .|...||...|..:     |||
  Fly   322 PAPTYPAA-------APASALQPGQFLQGMQGFTYGQFAGYQQAGYMGMGVQLPG 369

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fne	NP_001401058.1	ELAV_HUD_SF	23..369	CDD:273741	73/311 (23%)
CG34354	NP_001097953.2	PABP-1234	<90..420	CDD:130689	74/313 (24%)
		RRM2_TIA1_like	97..171	CDD:409789	25/91 (27%)
		RRM3_TIA1_like	202..276	CDD:409790	17/81 (21%)