Protein Alignment fne and elavl1

DIOPT Version :9

• Sequence 1: NP_001096965.1
• Gene: fne / 32245
• FlyBaseID: FBgn0086675
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: NP_001005461.1
• Gene: elavl1 / 448062
• XenbaseID: XB-GENE-481800
• Length: 326
• Species: Xenopus tropicalis
• Alignment Length: 350
• Identity: 197/350 - (56%)
• Similarity: 246/350 - (70%)
• Gaps: 30/350 - (8%)

  Fly     8 VKNGSANGSVDGSNDE-SRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSGNLVLPAS 71
            :.||..:...|...|: .|||||||||||.|||:|:|||||||||:||.||:||||:|:
 Frog     1 MSNGYGDHMDDVCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGH------ 59

  Fly    72 LTALNPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIKGANLYVSG 136
                        |||||||||:.|:|||:|:|||||||||:|.||||.|||||||||.||||:||
 Frog    60 ------------SLGYGFVNYLNAKDAERAINTLNGLRLQSKTIKVSVARPSSESIKDANLYISG 112

  Fly   137 LPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAIQELNGKTPKGYAE 201
            ||:.::|.|:|.||..||:||.||:|.|..:|||:||.|||||:|:|||.||...||..|.|.:|
 Frog   113 LPRTMTQKDVEDMFLPFGRIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSE 177

  Fly   202 PITVKFANNPSNSAKAQIAPPLTAYLTPQAAAATRRLAGAL-PSAGRIRYSPLAGDLLANSILPG 265
            |||||||.||:.:..       .|.|:....:..||..|.: ..|.|.|:||:..|.: :||...
 Frog   178 PITVKFAANPNQNKN-------MALLSQLCHSPARRFGGPVHHQAQRFRFSPMGVDHM-SSISGV 234

  Fly   266 N--AMTGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAV 328
            |  :...||||||:|||..:.:|.:|||:|||||||.:||||||..|:|||||||||||||:||.
 Frog   235 NVASSASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAA 299

  Fly   329 VAIQSLNGYTLGNRVLQVSFKTNKT 353
            :||.|||||.||::.|||.|||:|:
 Frog   300 MAIASLNGYRLGDKTLQVFFKTSKS 324

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fne	NP_001096965.1	ELAV_HUD_SF	23..354	CDD:273741	193/334 (58%)
elavl1	NP_001005461.1	RRM	19..326	CDD:330708	193/331 (58%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	121	1.000	Domainoid score	I5618
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	414	1.000	Inparanoid score	I1795
OMA	1	1.010	-	-		QHG55893
OrthoDB	1	1.010	-	-		D425303at33208
OrthoFinder	1	1.000	-	-		FOG0000313
OrthoInspector	1	1.000	-	-		mtm9409
Panther	1	1.100	-	-	O	PTHR10352
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X326
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	11	11.080