Protein Alignment fne and mod

DIOPT Version :9

• Sequence 1: NP_001096965.1
• Gene: fne / 32245
• FlyBaseID: FBgn0086675
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: NP_001247401.1
• Gene: mod / 43764
• FlyBaseID: FBgn0002780
• Length: 542
• Species: Drosophila melanogaster
• Alignment Length: 267
• Identity: 60/267 - (22%)
• Similarity: 104/267 - (38%)
• Gaps: 61/267 - (22%)

  Fly    22 DESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSGNLVLPASLTALNPALQQGQSLG 86
            :.:...::|..:...:|::::::.|..:..:|:.     .:|.|.::|.:
  Fly   254 ENNERTVVVGLIGPNITKDDLKTFFEKVAPVEAV-----TISSNRLMPRA--------------- 298

  Fly    87 YGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIKGAN---LYVSGLPK--NLSQPDL 146
              ||.....:|..||:. |:...|.::.|.|  .|.|.|||...:   |.|..:.|  :.|...|
  Fly   299 --FVRLASVDDIPKALK-LHSTELFSRFITV--RRISQESISRTSELTLVVENVGKHESYSSDAL 358

  Fly   147 EGMFASFGKIITSRILCDNISGLSKGV-GFIRFDQRNEAERAIQELNGKTPKGYAEPITVKFANN 210
            |.:|..||.:....::|      ||.| .|:.|.|.:.|.:|:.:|:|||...:...:. :|..:
  Fly   359 EKIFKKFGDVEEIDVVC------SKAVLAFVTFKQSDAATKALAQLDGKTVNKFEWKLH-RFERS 416

  Fly   211 PSNSAKAQIAPPLTAYLTPQAAAATRRLAGALPSAGRIRYSPLAG---------------DLLAN 260
            .|..|      .|...||..|..|.  |......:|.|....:.|               ..|||
  Fly   417 TSGRA------ILVTNLTSDATEAD--LRKVFNDSGEIESIIMLGQKAVVKFKDDEGFCKSFLAN 473

  Fly   261 SILPGNA 267
            ..:..||
  Fly   474 ESIVNNA 480

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fne	NP_001096965.1	ELAV_HUD_SF	23..354	CDD:273741	60/266 (23%)
mod	NP_001247401.1	RRM_SF	177..244	CDD:302621
		RRM_SF	260..327	CDD:240668	16/91 (18%)
		RRM_SF	342..411	CDD:240668	22/74 (30%)
		RRM_SF	422..>465	CDD:302621	9/44 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439651
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930