Protein Alignment fne and Elavl4

DIOPT Version :9

• Sequence 1: NP_001096965.1
• Gene: fne / 32245
• FlyBaseID: FBgn0086675
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: XP_006238653.1
• Gene: Elavl4 / 432358
• RGDID: 1560027
• Length: 393
• Species: Rattus norvegicus
• Alignment Length: 387
• Identity: 215/387 - (55%)
• Similarity: 265/387 - (68%)
• Gaps: 64/387 - (16%)

  Fly     8 VKNGSANGSVDG----------------SNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCK 56
            |.||..:.:.:|                :.|:|:||||||||||.|||||.||||.||||:||||
  Rat    25 VSNGPTSNTSNGPSSNNRNCPSPMQTGAATDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCK 89

  Fly    57 LVRDKVSGNLVLPASLTALNPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYAR 121
            |||||::                  |||||||||||:..:|||||:|||||||||.|.|||||||
  Rat    90 LVRDKIT------------------GQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYAR 136

  Fly   122 PSSESIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAER 186
            |||.||:.||||||||||.::|.:||.:|:.:|:|||||||.|.::|:|:||||||||:|.|||.
  Rat   137 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEE 201

  Fly   187 AIQELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTP---------------------- 229
            ||:.|||:.|.|..||||||||||||..:...:...|  |.:|
  Rat   202 AIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--YQSPNRRYPGPLHHQAQRFRLDNLLN 264

  Fly   230 QAAAATRRLAGAL-PSAGRIRYSPLAGDLLANSI---LPGNAMTGSGWCIFVYNLAPETEENVLW 290
            .|....|.::|.: |||...|:||:..|.:.:.:   :||:  ||:|||||||||:|:::|:|||
  Rat   265 MAYGVKRLMSGPVPPSACPPRFSPITIDGMTSLVGMNIPGH--TGTGWCIFVYNLSPDSDESVLW 327

  Fly   291 QLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 352
            |||||||||.:||||||..|:||||||||||||||||.:||.|||||.||:|||||||||||
  Rat   328 QLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 389

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fne	NP_001096965.1	ELAV_HUD_SF	23..354	CDD:273741	210/356 (59%)
Elavl4	XP_006238653.1	ELAV_HUD_SF	56..392	CDD:273741	210/356 (59%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	121	1.000	Domainoid score	I5544
eggNOG	1	0.900	-	-		E1_KOG0145
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	416	1.000	Inparanoid score	I1763
OMA	1	1.010	-	-		QHG55893
OrthoDB	1	1.010	-	-		D425303at33208
OrthoFinder	1	1.000	-	-		FOG0000313
OrthoInspector	1	1.000	-	-		mtm8987
orthoMCL	1	0.900	-	-		OOG6_103306
Panther	1	1.100	-	-	O	PTHR10352
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X326
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	12	11.880