Protein Alignment fne and elavl2

DIOPT Version :9

• Sequence 1: NP_001096965.1
• Gene: fne / 32245
• FlyBaseID: FBgn0086675
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: NP_001002172.2
• Gene: elavl2 / 431719
• ZFINID: ZDB-GENE-040704-9
• Length: 389
• Species: Danio rerio
• Alignment Length: 373
• Identity: 225/373 - (60%)
• Similarity: 267/373 - (71%)
• Gaps: 47/373 - (12%)

  Fly     8 VKNG----SANGSVDGSN------------DESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCK 56
            :.||    |:||....||            ::|:||||||||||.|||||::|||.||||:||||
Zfish    34 LSNGPSCTSSNGPNSVSNTCTSPVEMPNGSEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCK 98

  Fly    57 LVRDKVSGNLVLPASLTALNPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYAR 121
            |||||::                  |||||||||||:..:|||||:|||||||||.|.|||||||
Zfish    99 LVRDKIT------------------GQSLGYGFVNYMEPKDAEKAINTLNGLRLQTKTIKVSYAR 145

  Fly   122 PSSESIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAER 186
            |||.||:.||||||||||.::|.:||.:|:.||:|||||||.|.::|:|:||||||||:|.|||.
Zfish   146 PSSASIRDANLYVSGLPKTMTQKELEQLFSQFGRIITSRILVDQVTGVSRGVGFIRFDRRVEAEE 210

  Fly   187 AIQELNGKTPKGYAEPITVKFANNPS-NSAKAQIA----PPLTAYLTPQAAAATR-RLAGALPSA 245
            ||:.|||:.|.|..|||||||||||| .|::|.::    .|...|..|.|..|.| ||...|..|
Zfish   211 AIKGLNGQKPPGATEPITVKFANNPSQKSSQALLSHLYQSPNRRYPGPLAQQAQRFRLDNLLNMA 275

  Fly   246 GRI--RYSPLAGD---LLANSILPGNAMTGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVI 305
            ..:  |:||:..|   .||...||.:|  |:|||||||||||:.:||||||:|||||||.:||||
Zfish   276 YGVKSRFSPMTIDGVTSLAGINLPAHA--GTGWCIFVYNLAPDADENVLWQMFGPFGAVTNVKVI 338

  Fly   306 RDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNKT 353
            ||..|:||||||||||||||||.|||.|||||.||:||||||||||||
Zfish   339 RDFNTNKCKGFGFVTMTNYDEAAVAIASLNGYRLGDRVLQVSFKTNKT 386

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fne	NP_001096965.1	ELAV_HUD_SF	23..354	CDD:273741	218/342 (64%)
elavl2	NP_001002172.2	ELAV_HUD_SF	65..388	CDD:273741	218/342 (64%)
		RRM1_Hu	67..144	CDD:241094	61/94 (65%)
		RRM2_HuB	149..238	CDD:241219	59/88 (67%)
		RRM_SF	303..388	CDD:302621	70/84 (83%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170595838
Domainoid	1	1.000	123	1.000	Domainoid score	I5514
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H20930
Inparanoid	1	1.050	414	1.000	Inparanoid score	I1806
OMA	1	1.010	-	-		QHG55893
OrthoDB	1	1.010	-	-		D425303at33208
OrthoFinder	1	1.000	-	-		FOG0000313
OrthoInspector	1	1.000	-	-		mtm6531
orthoMCL	1	0.900	-	-		OOG6_103306
Panther	1	1.100	-	-	LDO	PTHR10352
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R3804
SonicParanoid	1	1.000	-	-		X326
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	14	13.940