Protein Alignment fne and lark

DIOPT Version :9

• Sequence 1: NP_001096965.1
• Gene: fne / 32245
• FlyBaseID: FBgn0086675
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: NP_523957.1
• Gene: lark / 38811
• FlyBaseID: FBgn0011640
• Length: 352
• Species: Drosophila melanogaster
• Alignment Length: 234
• Identity: 54/234 - (23%)
• Similarity: 96/234 - (41%)
• Gaps: 48/234 - (20%)

  Fly    28 LIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSGNLVLPASLTALNPALQQGQSLGYGFVNY 92
            |.:..|.:.....|:|:||...|.:..|.:|::                          ||||:.
  Fly     9 LFIGNLDEKTQATELRALFEKYGTVVECDVVKN--------------------------YGFVHM 47

  Fly    93 VRAEDAEKAVNTLNGLRLQNKVIKVSYAR----PSSESIKGANLYVSGLPKNLSQPDLEGMFASF 153
            ...:....|:..|||..|....|||..|:    |::.:.|   ::|..|......|::..:|..:
  Fly    48 ETEQQGRDAIQNLNGYTLNEFAIKVEAAKSRRAPNTPTTK---IFVGNLTDKTRAPEVRELFQKY 109

  Fly   154 GKIITSRILCDNISGLSKGVGFIRFDQRNEAERAIQELNGKTPKGYAEPITVKFANNPSNSAKAQ 218
            |.::.    ||    :.:..||:..|...:.:.||:||||:...|  :|:.|:.:.:... .|..
  Fly   110 GTVVE----CD----IVRNYGFVHLDCVGDVQDAIKELNGRVVDG--QPLKVQVSTSRVR-PKPG 163

  Fly   219 IAPPLTAYLTPQAAAATR---RLAGALPSAGRIRYSPLA 254
            :..|...|...::...::   ||.|: ...||...|||:
  Fly   164 MGDPEQCYRCGRSGHWSKECPRLYGS-AGGGREPPSPLS 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fne	NP_001096965.1	ELAV_HUD_SF	23..354	CDD:273741	54/234 (23%)
lark	NP_523957.1	RRM1_2_CoAA_like	8..73	CDD:409779	20/89 (22%)
		RRM1_2_CoAA_like	87..152	CDD:409779	19/77 (25%)
		hnRNP-R-Q	<88..>258	CDD:273732	30/126 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439660
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840