Protein Alignment fne and CG1316

DIOPT Version :9

• Sequence 1: NP_001096965.1
• Gene: fne / 32245
• FlyBaseID: FBgn0086675
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: NP_647887.1
• Gene: CG1316 / 38526
• FlyBaseID: FBgn0035526
• Length: 470
• Species: Drosophila melanogaster
• Alignment Length: 407
• Identity: 86/407 - (21%)
• Similarity: 155/407 - (38%)
• Gaps: 118/407 - (28%)

  Fly     9 KNGSANGSVDGSNDE----SRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSGNLVLP 69
            ::|...|..:.|||:    ||..:|.|   :..|:|:.|..||..||:|...:|:||
  Fly     9 RSGGGRGGQEYSNDDDPPMSRLFIICN---KAHTEEDFREAFSPYGEIEDIWVVKDK-------- 62

  Fly    70 ASLTALNPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRL--QNKVIKVSYA--------RPSS 124
                      ...::.|..:|.:.:..||.||...:||..:  .::.:||..|        :..:
  Fly    63 ----------HTQENKGIAYVKFSKTSDAAKAQEEMNGKTIGKMDRTLKVLVAANRNQGSNKSEN 117

  Fly   125 ESIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAIQ 189
            |..|...|::. :||..::.|:...|:.:|.:.:..|:.:..:|..||.|::||.:...|..|.:
  Fly   118 EQEKYVRLFIV-IPKTATEEDIREEFSQWGDVESVTIVKEKNNGNPKGFGYVRFTKFYYAAVAFE 181

  Fly   190 ELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTPQAAAATRRLAGALPSAGRIRYSPLA 254
            ..:.|....:||                           |:.:..|:|.....||.....||...
  Fly   182 NCSAKYKAVFAE---------------------------PKGSTRTQRDQYGRPSEDNPLYSSSG 219

  Fly   255 -GDLLANSILPGNAMTGSG--------W-----------------------CIFVYNLAPETEEN 287
             |:...|.   |.:.:|.|        |                       |:.| |::....::
  Fly   220 RGNSNFNG---GGSSSGGGGSNSYNNDWNVSQNNDMAAFLRMQNVPVAQPSCLEV-NVSNCVNQD 280

  Fly   288 VLWQLFGPFGAVQSVKVIRD--LQTSKCKGFGFVTMTNYDEAVVAIQSLNG--YTLGNRV----- 343
            .||:||.....:...:::|:  .:|::    ..|...|.:.|:.|...|:|  |.:|.|:
  Fly   281 QLWRLFDIIPGLDYCQIMREHGPRTNE----ALVVYDNPEAAIYAKDKLHGLEYPMGERIIVKVN 341

  Fly   344 ------LQVSFKTNKTK 354
                  :..||...:||
  Fly   342 GMSSARMDTSFIDKRTK 358

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fne	NP_001096965.1	ELAV_HUD_SF	23..354	CDD:273741	79/391 (20%)
CG1316	NP_647887.1	RRM1_RBM45	25..105	CDD:240812	25/100 (25%)
		RRM2_RBM45	122..195	CDD:240813	18/100 (18%)
		RRM3_RBM45	267..339	CDD:240814	18/76 (24%)
		RRM4_RBM45	383..449	CDD:240815

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439655
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840