Protein Alignment fne and Sxl

DIOPT Version :9

• Sequence 1: NP_001096965.1
• Gene: fne / 32245
• FlyBaseID: FBgn0086675
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: NP_001259303.1
• Gene: Sxl / 3772180
• FlyBaseID: FBgn0264270
• Length: 722
• Species: Drosophila melanogaster
• Alignment Length: 256
• Identity: 90/256 - (35%)
• Similarity: 135/256 - (52%)
• Gaps: 46/256 - (17%)

  Fly     1 MTNAMDIVKNGSAN----------GSVDGSND--ESRTNLIVNYLPQTMTQEEMRSLFSSIGELE 53
            |.:...:..|.|.|          ||.|..||  .|.||||||||||.||..|:.:||.:||.:.
  Fly    80 MCHLPPMASNNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRELYALFRAIGPIN 144

  Fly    54 SCKLVRDKVSGNLVLPASLTALNPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVS 118
            :|:::||                  .:.|.|.||.||::....|:::|:..|||:.::||.:|||
  Fly   145 TCRIMRD------------------YKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVS 191

  Fly   119 YARPSSESIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNE 183
            ||||..||||..||||:.||:.::...|:.:|..:|.|:...||.|.::|..:||.|:|:::|.|
  Fly   192 YARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREE 256

  Fly   184 AERAIQELNGKTPKGYAEPITVKFANNPSNS-----------AKAQIAPPLTAYLTPQAAA 233
            |:.||..||...|:|.::|::|:.|.....:           ..|.:.||     .||..|
  Fly   257 AQEAISALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPP-----PPQPPA 312

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fne	NP_001096965.1	ELAV_HUD_SF	23..354	CDD:273741	81/222 (36%)
Sxl	NP_001259303.1	RRM1_SXL	117..197	CDD:241093	40/97 (41%)
		RRM2_Hu_like	203..281	CDD:240822	29/77 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	76	1.000	Inparanoid score	I1646
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000313
OrthoInspector	1	1.000	-	-		mtm1072
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.960