Protein Alignment fne and pAbp

DIOPT Version :9

• Sequence 1: NP_001096965.1
• Gene: fne / 32245
• FlyBaseID: FBgn0086675
• Length: 356
• Species: Drosophila melanogaster
• Sequence 2: NP_476667.1
• Gene: pAbp / 37070
• FlyBaseID: FBgn0265297
• Length: 634
• Species: Drosophila melanogaster
• Alignment Length: 334
• Identity: 86/334 - (25%)
• Similarity: 140/334 - (41%)
• Gaps: 67/334 - (20%)

  Fly    27 NLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSGNLVLPASLTALNPALQQGQSLGYGFVN 91
            |:.:..|.:.:..:.:...||:.|.:.|||:..|                   ::|.|.|||||:
  Fly    91 NVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATD-------------------EKGNSKGYGFVH 136

  Fly    92 YVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIKG--------ANLYVSGLPKNLSQPDLEG 148
            :...|.|..:::.:||:.|..|.:.|....|..|..|.        .|:||....::.....|:.
  Fly   137 FETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKE 201

  Fly   149 MFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAIQELNGKTPKGYAEPITVKFANNPSN 213
            .|..:|||.:.:::... .|.|||.||:.|:....||.|:|.|||| ..|..:.:.|
  Fly   202 FFEPYGKITSYKVMSKE-DGKSKGFGFVAFETTEAAEAAVQALNGK-DMGEGKSLYV-------- 256

  Fly   214 SAKAQIAPPLTAYLTPQAAAATRRLAGALPSAGRIRYSPLAGDLLANSILPGNAMTGSGWCIFVY 278
             |:||           :.|...:.|........:.|:..:.|   .|              ::|.
  Fly   257 -ARAQ-----------KKAERQQELKRKFEELKQKRHESVFG---VN--------------LYVK 292

  Fly   279 NLAPETEENVLWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRV 343
            ||....:::.|...|.|:|.:.|.||:.| :..:.||||||......||..|:..|||..:|::.
  Fly   293 NLDDTIDDDRLRIAFSPYGNITSAKVMTD-EEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKP 356

  Fly   344 LQVSFKTNK 352
            |.|:....|
  Fly   357 LYVALAQRK 365

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fne	NP_001096965.1	ELAV_HUD_SF	23..354	CDD:273741	86/334 (26%)
pAbp	NP_476667.1	PABP-1234	2..625	CDD:130689	86/334 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439613
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840