Protein Alignment fne and Spx

DIOPT Version :10

• Sequence 1: NP_001401058.1
• Gene: fne / 32245
• FlyBaseID: FBgn0086675
• Length: 371
• Species: Drosophila melanogaster
• Sequence 2: NP_511058.1
• Gene: Spx / 31558
• FlyBaseID: FBgn0015818
• Length: 347
• Species: Drosophila melanogaster
• Alignment Length: 249
• Identity: 60/249 - (24%)
• Similarity: 99/249 - (39%)
• Gaps: 72/249 - (28%)

  Fly   120 ARPSSESIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEA 184
            |.|.:|..:.|.:|..||...:|:..|..:|...|.::...:..|.::.:.:|.||:.|....:|
  Fly     3 AGPIAERNQDATIYAGGLDDKVSETLLWELFVQAGPVVNVHMPKDRVTQMHQGYGFVEFLSEEDA 67

  Fly   185 ERAIQELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTPQAAAATRRLAGALPSAGRIS 249
            :..|:.:|  ..|.|.:||.|       |.|.|.
  Fly    68 DYGIKIMN--MIKLYGKPIRV-------NKASAH------------------------------- 92

  Fly   250 IGKSPMLAINKGLQRYSPLAGDLLANSILPGNAMTGSGWCIFVYNLAPETEENVLWQLFGPFGAV 314
                     .|.|        |:.||              ||:.||..|.:|.:|:..|..||.:
  Fly    93 ---------QKNL--------DVGAN--------------IFIGNLDVEVDEKLLYDTFSAFGVI 126

  Fly   315 -QSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 367
             |:.|::||.:|.|.|.|.|:...:::.:..|:.::||..|.||.:.||:...|
  Fly   127 LQTPKIMRDPETGKSKSFAFINFASFEASDAAMDAMNGQYLCNRPISVSYAFKK 180

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fne	NP_001401058.1	ELAV_HUD_SF	23..369	CDD:273741	60/249 (24%)
Spx	NP_511058.1	RRM1_SF3B4	15..88	CDD:409771	20/81 (25%)
		RRM2_SF3B4	99..181	CDD:409772	30/96 (31%)