Protein Alignment fne and elavl3

DIOPT Version :10

• Sequence 1: NP_001401058.1
• Gene: fne / 32245
• FlyBaseID: FBgn0086675
• Length: 371
• Species: Drosophila melanogaster
• Sequence 2: XP_009298008.1
• Gene: elavl3 / 30732
• ZFINID: ZDB-GENE-980526-76
• Length: 366
• Species: Danio rerio
• Alignment Length: 381
• Identity: 222/381 - (58%)
• Similarity: 264/381 - (69%)
• Gaps: 51/381 - (13%)

  Fly     8 VKNGSA-----NG---SVDGSNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSG 64
            |.||.:     ||   |.:|:.|:|:||||||||||.|||||.:|||.||||:|||||||||::
Zfish    12 VSNGPSGTSLPNGPVISTNGATDDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKIT- 75

  Fly    65 NLVLPASLTALNPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIKG 129
                             ||||||||||||...||:||:||||||:||.|.||||||||||.||:.
Zfish    76 -----------------GQSLGYGFVNYVDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRD 123

  Fly   130 ANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNI-SGLSKGVGFIRFDQRNEAERAIQELNG 193
            ||||||||||.:||.|:|.:|:.:|:|||||||.|.: :|:|:||||||||:|||||.||:.|||
Zfish   124 ANLYVSGLPKTMSQKDMEQLFSQYGRIITSRILVDQVTAGISRGVGFIRFDKRNEAEEAIKGLNG 188

  Fly   194 KTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTPQAAAATRRLAG---------ALPSAGRIS 249
            :.|.|.|||||||||||||....       .|.||.....|.||..|         .|.:....|
Zfish   189 QKPLGAAEPITVKFANNPSQKTG-------QALLTQLYQTAARRYTGPLHHQTQRFRLDNLLNAS 246

  Fly   250 IGKSPMLAINKGLQRYSPLAGDLLANSILPG---NAMTGSGWCIFVYNLAPETEENVLWQLFGPF 311
            .|....|::   |.|:||:..|.:.:  |.|   ...||:|||||||||:||.:|:|||||||||
Zfish   247 YGVKSSLSV---LPRFSPITIDSMTS--LAGVNLTGPTGAGWCIFVYNLSPEADESVLWQLFGPF 306

  Fly   312 GAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 367
            |||.:||||||..|:||||||||||||||||.:||.|||||.||:|||||||||:|
Zfish   307 GAVTNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTSK 362

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fne	NP_001401058.1	ELAV_HUD_SF	23..369	CDD:273741	214/358 (60%)
elavl3	XP_009298008.1	ELAV_HUD_SF	35..365	CDD:273741	214/358 (60%)