Protein Alignment fne and Elavl3

DIOPT Version :10

• Sequence 1: NP_001401058.1
• Gene: fne / 32245
• FlyBaseID: FBgn0086675
• Length: 371
• Species: Drosophila melanogaster
• Sequence 2: NP_758827.1
• Gene: Elavl3 / 282824
• RGDID: 628892
• Length: 367
• Species: Rattus norvegicus
• Alignment Length: 371
• Identity: 218/371 - (58%)
• Similarity: 262/371 - (70%)
• Gaps: 44/371 - (11%)

  Fly    10 NGSANGSVDGSNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSGNLVLPASLTA 74
            ||...|: :|:.|:|:||||||||||.|||:|.:|||.|||::|||||||||::
  Rat    24 NGPLLGT-NGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKIT----------- 76

  Fly    75 LNPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIKGANLYVSGLPK 139
                   |||||||||||....||:||:||||||:||.|.||||||||||.||:.||||||||||
  Rat    77 -------GQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPK 134

  Fly   140 NLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAIQELNGKTPKGYAEPIT 204
            .:||.::|.:|:.:|:|||||||.|..:|:|:||||||||:|.|||.||:.|||:.|.|.|||||
  Rat   135 TMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 199

  Fly   205 VKFANNPSNSAKAQIAPPLTAYLTPQAAAATRRLAG---------ALPSAGRISIG-KSPMLAIN 259
            ||||||||....       .|.||....::.||.||         .|.:...::.| |||:..|
  Rat   200 VKFANNPSQKTG-------QALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKSPLSLI- 256

  Fly   260 KGLQRYSPLAGD---LLANSILPGNAMTGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIR 321
               .|:||:|.|   .||...|.|.| .|:|||||||||:||.:|:||||||||||||.:|||||
  Rat   257 ---ARFSPIAIDGMSGLAGVGLSGGA-AGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 317

  Fly   322 DLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 367
            |..|:||||||||||||||||.:||.|||||.||.|||||||||:|
  Rat   318 DFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 363

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fne	NP_001401058.1	ELAV_HUD_SF	23..369	CDD:273741	213/358 (59%)
Elavl3	NP_758827.1	ELAV_HUD_SF	36..366	CDD:273741	213/358 (59%)