DRSC/TRiP Functional Genomics Resources

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Protein Alignment fne and ELAVL4

DIOPT Version :9

Sequence 1:NP_001096965.1 Gene:fne / 32245 FlyBaseID:FBgn0086675 Length:356 Species:Drosophila melanogaster
Sequence 2:XP_011539191.1 Gene:ELAVL4 / 1996 HGNCID:3315 Length:416 Species:Homo sapiens


Alignment Length:387 Identity:215/387 - (55%)
Similarity:265/387 - (68%) Gaps:64/387 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VKNGSANGSVDG----------------SNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCK 56
            |.||..:.:.:|                :.|:|:||||||||||.|||||.||||.||||:||||
Human    48 VSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIGEIESCK 112

  Fly    57 LVRDKVSGNLVLPASLTALNPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYAR 121
            |||||::                  |||||||||||:..:|||||:|||||||||.|.|||||||
Human   113 LVRDKIT------------------GQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYAR 159

  Fly   122 PSSESIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAER 186
            |||.||:.||||||||||.::|.:||.:|:.:|:|||||||.|.::|:|:||||||||:|.|||.
Human   160 PSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEE 224

  Fly   187 AIQELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTP---------------------- 229
            ||:.|||:.|.|..||||||||||||..:...:...|  |.:|                      
Human   225 AIKGLNGQKPSGATEPITVKFANNPSQKSSQALLSQL--YQSPNRRYPGPLHHQAQRFRLDNLLN 287

  Fly   230 QAAAATRRLAGAL-PSAGRIRYSPLAGDLLANSI---LPGNAMTGSGWCIFVYNLAPETEENVLW 290
            .|....|.::|.: |||...|:||:..|.:.:.:   :||:  ||:|||||||||:|:::|:|||
Human   288 MAYGVKRLMSGPVPPSACPPRFSPITIDGMTSLVGMNIPGH--TGTGWCIFVYNLSPDSDESVLW 350

  Fly   291 QLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 352
            |||||||||.:||||||..|:||||||||||||||||.:||.|||||.||:|||||||||||
Human   351 QLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNK 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fneNP_001096965.1 ELAV_HUD_SF 23..354 CDD:273741 210/356 (59%)
ELAVL4XP_011539191.1 ELAV_HUD_SF 79..415 CDD:273741 210/356 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 121 1.000 Domainoid score I5685
eggNOG 1 0.900 - - E1_KOG0145
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 419 1.000 Inparanoid score I1806
Isobase 1 0.950 - 0.861654 Normalized mean entropy S149
OMA 1 1.010 - - QHG55893
OrthoDB 1 1.010 - - D425303at33208
OrthoFinder 1 1.000 - - FOG0000313
OrthoInspector 1 1.000 - - mtm8515
orthoMCL 1 0.900 - - OOG6_103306
Panther 1 1.100 - - O PTHR10352
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3804
SonicParanoid 1 1.000 - - X326
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.820

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