DRSC/TRiP Functional Genomics Resources

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Protein Alignment fne and ELAVL2

DIOPT Version :9

Sequence 1:NP_001096965.1 Gene:fne / 32245 FlyBaseID:FBgn0086675 Length:356 Species:Drosophila melanogaster
Sequence 2:XP_011516080.2 Gene:ELAVL2 / 1993 HGNCID:3313 Length:392 Species:Homo sapiens


Alignment Length:366 Identity:219/366 - (59%)
Similarity:262/366 - (71%) Gaps:42/366 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 NGSANG----------SVD-GSNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVS 63
            |.:|||          .|| |:.::|:||||||||||.|||||::|||.||||:|||||||||::
Human    44 NNTANGPTTINNNCSSPVDSGNTEDSKTNLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKIT 108

  Fly    64 GNLVLPASLTALNPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIK 128
                              |||||||||||:..:|||||:|||||||||.|.||||||||||.||:
Human   109 ------------------GQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIR 155

  Fly   129 GANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAIQELNG 193
            .||||||||||.::|.:||.:|:.:|:|||||||.|.::|:|:||||||||:|.|||.||:.|||
Human   156 DANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNG 220

  Fly   194 KTPKGYAEPITVKFANNPSNSAKAQI-----APPLTAYLTPQAAAATR-RLAGALPSAGRI--RY 250
            :.|.|..||||||||||||......|     ..|...|..|.|..|.| ||...|..|..:  |:
Human   221 QKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNRRYPGPLAQQAQRFRLDNLLNMAYGVKSRF 285

  Fly   251 SPLAGD---LLANSILPGNAMTGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDLQTSK 312
            ||:..|   .||...:||:  .|:|||||||||||:.:|::|||:|||||||.:||||||..|:|
Human   286 SPMTIDGMTSLAGINIPGH--PGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNK 348

  Fly   313 CKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNKT 353
            |||||||||||||||.:||.|||||.||:||||||||||||
Human   349 CKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKT 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fneNP_001096965.1 ELAV_HUD_SF 23..354 CDD:273741 212/342 (62%)
ELAVL2XP_011516080.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159632
Domainoid 1 1.000 121 1.000 Domainoid score I5685
eggNOG 1 0.900 - - E1_KOG0145
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H20930
Inparanoid 1 1.050 419 1.000 Inparanoid score I1806
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55893
OrthoDB 1 1.010 - - D425303at33208
OrthoFinder 1 1.000 - - FOG0000313
OrthoInspector 1 1.000 - - mtm8515
orthoMCL 1 0.900 - - OOG6_103306
Panther 1 1.100 - - LDO PTHR10352
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3804
SonicParanoid 1 1.000 - - X326
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1716.800

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