Protein Alignment fne and Elavl3

DIOPT Version :10

• Sequence 1: NP_001401058.1
• Gene: fne / 32245
• FlyBaseID: FBgn0086675
• Length: 371
• Species: Drosophila melanogaster
• Sequence 2: NP_034617.1
• Gene: Elavl3 / 15571
• MGIID: 109157
• Length: 367
• Species: Mus musculus
• Alignment Length: 371
• Identity: 218/371 - (58%)
• Similarity: 262/371 - (70%)
• Gaps: 44/371 - (11%)

  Fly    10 NGSANGSVDGSNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSGNLVLPASLTA 74
            ||...|: :|:.|:|:||||||||||.|||:|.:|||.|||::|||||||||::
Mouse    24 NGPLLGT-NGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKIT----------- 76

  Fly    75 LNPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIKGANLYVSGLPK 139
                   |||||||||||....||:||:||||||:||.|.||||||||||.||:.||||||||||
Mouse    77 -------GQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPK 134

  Fly   140 NLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAIQELNGKTPKGYAEPIT 204
            .:||.::|.:|:.:|:|||||||.|..:|:|:||||||||:|.|||.||:.|||:.|.|.|||||
Mouse   135 TMSQKEMEQLFSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 199

  Fly   205 VKFANNPSNSAKAQIAPPLTAYLTPQAAAATRRLAG---------ALPSAGRISIG-KSPMLAIN 259
            ||||||||....       .|.||....::.||.||         .|.:...::.| |||:..|
Mouse   200 VKFANNPSQKTG-------QALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKSPLSLI- 256

  Fly   260 KGLQRYSPLAGD---LLANSILPGNAMTGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIR 321
               .|:||:|.|   .||...|.|.| .|:|||||||||:||.:|:||||||||||||.:|||||
Mouse   257 ---ARFSPIAIDGMSGLAGVGLSGGA-AGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 317

  Fly   322 DLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 367
            |..|:||||||||||||||||.:||.|||||.||.|||||||||:|
Mouse   318 DFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 363

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
fne	NP_001401058.1	ELAV_HUD_SF	23..369	CDD:273741	213/358 (59%)
Elavl3	NP_034617.1	ELAV_HUD_SF	36..366	CDD:273741	213/358 (59%)