DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment fne and LOC1270460

DIOPT Version :10

Sequence 1:NP_001401058.1 Gene:fne / 32245 FlyBaseID:FBgn0086675 Length:371 Species:Drosophila melanogaster
Sequence 2:XP_061510041.1 Gene:LOC1270460 / 1270460 VectorBaseID:AGAMI1_011823 Length:346 Species:Anopheles gambiae


Alignment Length:372 Identity:253/372 - (68%)
Similarity:296/372 - (79%) Gaps:32/372 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTNAMDIVKNGSANGSVDGSNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSGN 65
            ::|.::.|:....:||:....::|:||||||||||||||||::|||||||::|||||:||||:  
Mosquito     2 ISNGLETVQQNGRSGSIGSGQEDSKTNLIVNYLPQTMTQEEVKSLFSSIGDVESCKLIRDKVT-- 64

  Fly    66 LVLPASLTALNPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIKGA 130
                            |||||||||||.|.||||||:||.||||||||.||||:|||||::||||
Mosquito    65 ----------------GQSLGYGFVNYHRPEDAEKAINTFNGLRLQNKTIKVSFARPSSDAIKGA 113

  Fly   131 NLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAIQELNGKT 195
            |||||||.|:::|.|||.:|.::|:|||||||||||:||||||||||||||:|||||||:|||.|
Mosquito   114 NLYVSGLSKSMTQQDLENLFNAYGQIITSRILCDNITGLSKGVGFIRFDQRSEAERAIQQLNGTT 178

  Fly   196 PKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTPQAAAATRRL-AGAL-PSAGRISIGKSPMLAI 258
            |||.:|||||||||||||:....| |||.|||||  ....||. .|.: |.:||.|:..:     
Mosquito   179 PKGASEPITVKFANNPSNNINKAI-PPLAAYLTP--TPNLRRFPPGPIHPLSGRFSLPSN----- 235

  Fly   259 NKGLQRYSPLAGDLLANSILPGNAMTGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIRDL 323
               ..|||||.|| |.:|:|..||:.||||||||||||||||||||||||||||||||||||:||
Mosquito   236 ---FSRYSPLTGD-LGSSVLSANAINGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIKDL 296

  Fly   324 QTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNKTKT 370
            ||:|||||||||||||||||||:||||||||||||||||||||.||:
Mosquito   297 QTNKCKGFGFVTMTNYDEAVVAVQSLNGYTLGNRVLQVSFKTNNTKS 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fneNP_001401058.1 ELAV_HUD_SF 23..369 CDD:273741 247/347 (71%)
LOC1270460XP_061510041.1 None

Return to query results.
Submit another query.