Sequence 1: | NP_001096965.1 | Gene: | fne / 32245 | FlyBaseID: | FBgn0086675 | Length: | 356 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012815941.1 | Gene: | elavl4 / 100125165 | XenbaseID: | XB-GENE-948210 | Length: | 430 | Species: | Xenopus tropicalis |
Alignment Length: | 390 | Identity: | 221/390 - (56%) |
---|---|---|---|
Similarity: | 270/390 - (69%) | Gaps: | 53/390 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 VKNGSANGSVDG----------------SNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCK 56
Fly 57 LVRDKVSG--------NLVLPAS---LTALNPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRL 110
Fly 111 QNKVIKVSYARPSSESIKGANLYVSGLPKNLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGF 175
Fly 176 IRFDQRNEAERAIQELNGKTPKGYAEPITVKFANNPSNSAKAQIAPPLTAYLTPQAAAATRRLAG 240
Fly 241 AL--------------PSAGRIRYSPLAGDLLANSI---LPGNAMTGSGWCIFVYNLAPETEENV 288
Fly 289 LWQLFGPFGAVQSVKVIRDLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNKT 353
Fly 354 353 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
fne | NP_001096965.1 | ELAV_HUD_SF | 23..354 | CDD:273741 | 216/359 (60%) |
elavl4 | XP_012815941.1 | ELAV_HUD_SF | 78..429 | CDD:273741 | 216/359 (60%) |
RRM1_Hu | 80..186 | CDD:241094 | 67/105 (64%) | ||
RRM_SF | 191..280 | CDD:302621 | 59/88 (67%) | ||
RRM3_HuD | 344..429 | CDD:241100 | 68/84 (81%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 121 | 1.000 | Domainoid score | I5618 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 414 | 1.000 | Inparanoid score | I1795 |
OMA | 1 | 1.010 | - | - | QHG55893 | |
OrthoDB | 1 | 1.010 | - | - | D425303at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000313 | |
OrthoInspector | 1 | 1.000 | - | - | mtm9409 | |
Panther | 1 | 1.100 | - | - | O | PTHR10352 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3804 |
SonicParanoid | 1 | 1.000 | - | - | X326 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
11 | 11.110 |