DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4645 and yipf2

DIOPT Version :9

Sequence 1:NP_001285171.1 Gene:CG4645 / 32244 FlyBaseID:FBgn0030435 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_001008078.1 Gene:yipf2 / 493440 XenbaseID:XB-GENE-997076 Length:301 Species:Xenopus tropicalis


Alignment Length:320 Identity:105/320 - (32%)
Similarity:165/320 - (51%) Gaps:47/320 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 QRGDPLADLIYDMTSSAQGFSGAASSGGSQPQNSSLDGSAGGG--------------GGGAKLSL 107
            |..|..|||:    ::..|.:..:.:..|:||:::|  ..||.              ....|.|.
 Frog    10 QEFDEAADLL----AADPGATTKSLTEESRPQHATL--HVGGDSEEEEGESDQTELLASQKKTSS 68

  Fly   108 F-TIEYYQQFFNVDTYMVLERIANSMIPKRASGNYLRMNIGENPDLYGPFWITVTLIFSIAISGN 171
            | |.:|||.||::|||.||:||..|::|.... |::|.::..||||||||||..||:.::.|.||
 Frog    69 FWTFQYYQDFFDIDTYQVLDRIRGSILPIPGK-NFVRNHLRNNPDLYGPFWICTTLVITVTIMGN 132

  Fly   172 IASY-LQQATDAYKWHYNFHLVSYAATSIFLYANILPAVLWALFKYSLKPVDSADAVETDSASYM 235
            :.:| |....:.|::...||.:|.|..:|:.||..:|..||...::       ...|..:.:|| 
 Frog   133 LGTYMLLHDQEGYQYSPEFHKLSVAGVAIYSYAWAVPLGLWGFLQW-------RKGVTPEVSSY- 189

  Fly   236 PSLLSLMCIYGYSLAIYIPVSILWVINISLLQWLLVITAALLSGTVLIAVLTPALR--NSQFSLF 298
             |.:..:|||||||:.|:|.::|.|:...:.:|:|::.|..||..||:....|.:|  |....:.
 Frog   190 -SFMETVCIYGYSLSAYVPATVLCVVPQDIFRWILILVAMSLSSLVLVLAFWPHIRRDNKVVVIS 253

  Fly   299 LIVGILSAHVVLAAGFLLYFFHNPTVPSLDP-VAPTPAAPAAPAALKAVTQAVVNAVPGN 357
            |:..:::.||:||.|..||||..|.||:... ||.|.|            |.:::.|..|
 Frog   254 LMAIMVALHVLLAVGCKLYFFRQPQVPNNSKHVAVTTA------------QKIISHVTAN 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4645NP_001285171.1 Yip1 149..310 CDD:282716 56/163 (34%)
yipf2NP_001008078.1 Yip1 79..261 CDD:377418 66/191 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 143 1.000 Domainoid score I4622
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 178 1.000 Inparanoid score I3915
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1425332at2759
OrthoFinder 1 1.000 - - FOG0001880
OrthoInspector 1 1.000 - - otm49243
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1411
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

Return to query results.
Submit another query.