DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4645 and Yipf1

DIOPT Version :10

Sequence 1:NP_572841.1 Gene:CG4645 / 32244 FlyBaseID:FBgn0030435 Length:360 Species:Drosophila melanogaster
Sequence 2:NP_663525.1 Gene:Yipf1 / 230584 MGIID:1915532 Length:306 Species:Mus musculus


Alignment Length:360 Identity:125/360 - (34%)
Similarity:175/360 - (48%) Gaps:71/360 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 ADDLLQFRDYSGGA--------PAQINVNSPTHGGSGGSGGGSAGSGGSVGGGGANAQRQRGDPL 62
            |.|.|||.::..||        ...||:..|:     .|.|......||||       |:..:.|
Mouse     3 AVDDLQFEEFGDGATLLAANPDATTINIEDPS-----VSFGHQPRPPGSVG-------REEDEEL 55

  Fly    63 ADLIYDMTSSAQGFSGAASSGGSQPQNSSLDGSAGGGGGGAKLSLFTIEYYQQFFNVDTYMVLER 127
            ..                        |:..|.:....|.......:|.||||.||:||||.|.:|
Mouse    56 LG------------------------NNDSDETELLAGQKRSSPFWTFEYYQTFFDVDTYQVFDR 96

  Fly   128 IANSMIPKRASGNYLRMNIGENPDLYGPFWITVTLIFSIAISGNIASYLQQATDAYKWHY--NFH 190
            |..|::|.... |::|:.|..||||||||||..||:|:||||||::::|....:. .:||  .|.
Mouse    97 IKGSLLPVPGK-NFVRLYIRSNPDLYGPFWICATLVFAIAISGNLSNFLIHLGEK-TYHYVPEFQ 159

  Fly   191 LVSYAATSIFLYANILPAVLWALFKYSLKPVDSADAVETDSASYMPSLLSLMCIYGYSLAIYIPV 255
            .||.|||.|:.||.::|..||....:....|.|       ..||  |.|.::|:|||||.||||.
Mouse   160 KVSIAATVIYAYAWLVPLALWGFLLWRNSKVMS-------MVSY--SFLEIVCVYGYSLFIYIPT 215

  Fly   256 SILWVINISLLQWLLVITAALLSGTVLIAVLTPALR--NSQFSLFLIVGILSAHVVLAAGFLLYF 318
            ::||:|...:::|:||:.|..:||:||:....||:|  |.:.:|..||.|:..||:|:.|.|.||
Mouse   216 AVLWIIPQRVVRWVLVMIALGVSGSVLVMTFWPAVREDNRRVALATIVTIVLLHVLLSVGCLAYF 280

  Fly   319 FHNPTVPSLDPVAPTPAAPAAPAALKAVTQAVVNA 353
            |..|.:..|            |||:....|.|..|
Mouse   281 FDAPEMDHL------------PAAITTPNQTVTAA 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4645NP_572841.1 Yip1 146..316 CDD:461468 74/173 (43%)
Yipf1NP_663525.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..63 10/68 (15%)
Yip1 101..277 CDD:461468 77/186 (41%)

Return to query results.
Submit another query.