DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG4645 and yipf1

DIOPT Version :9

Sequence 1:	NP_001285171.1	Gene:	CG4645 / 32244	FlyBaseID:	FBgn0030435	Length:	360	Species:	Drosophila melanogaster
Sequence 2:	XP_002931506.2	Gene:	yipf1 / 100490344	XenbaseID:	XB-GENE-948257	Length:	302	Species:	Xenopus tropicalis

Alignment Length:	318	Identity:	117/318 - (36%)
Similarity:	167/318 - (52%)	Gaps:	45/318 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly    60 DPLADLIY---DMTSSAQGFSGAASSG----GSQPQNSSLDGSAGG-----GGGGAKLSLFTIEY 112
            |..|.|:.   |.|:.:.|.:.:.|.|    .||..:..:.|....     ||...:...:|.:|
Frog    13 DDAASLLAANPDATTVSFGETESRSKGHRGNRSQEDDHLMSGEVSDKTELLGGQKKQAPFWTFDY 77

  Fly   113 YQQFFNVDTYMVLERIANSMIPKRASGNYLRMNIGENPDLYGPFWITVTLIFSIAISGNIASYLQ 177
            ||.||::||..||:||..|::| ....|::|:.:..||||||||||..||||:|.||||::::|.
Frog    78 YQTFFDIDTLQVLDRIKGSVLP-MPGRNFIRLYVRSNPDLYGPFWICATLIFTITISGNLSNFLL 141

  Fly   178 QATDAYKWHY--NFHLVSYAATSIFLYANILPAVLWALFKYSLKPVDSADAVETDSASYMPSLLS 240
            ..... |:||  .|..||.|||:|:.|..::|..||....:....|.|       ..||  |.|.
Frog   142 HQGKP-KYHYVPEFRKVSIAATAIYAYTWLVPLALWGFLTWRQSKVMS-------MVSY--SFLE 196

  Fly   241 LMCIYGYSLAIYIPVSILWVINISLLQWLLVITAALLSGTVLIAVLTPALR--NSQFSLFLIVGI 303
            ::|:|||||.||||.||:|:|:..:|:|:|:..|..|||.|||....||:|  |.:.::..:|.|
Frog   197 IVCVYGYSLFIYIPTSIMWIIHAEMLRWVLMALAMSLSGAVLILTFWPAVREENRKIAVTTLVVI 261

  Fly   304 LSAHVVLAAGFLLYFFHNPTVPSLDPVAPTPAAPAAPAALKAVTQAVVNAVPG-NQTH 360
            :..|.:||.||:.|||        ||.....|..         |:..:||..| .|||
Frog   262 MLLHALLAVGFVEYFF--------DPPEENYATH---------TRDSINATRGIVQTH 302

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4645	NP_001285171.1	Yip1	149..310	CDD:282716	71/164 (43%)
yipf1	XP_002931506.2	Yip1	96..273	CDD:398520	78/187 (42%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	143	1.000	Domainoid score	I4622
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H5898
Inparanoid	1	1.050	178	1.000	Inparanoid score	I3915
OMA	1	1.010	-	-		QHG54497
OrthoDB	1	1.010	-	-		D1425332at2759
OrthoFinder	1	1.000	-	-		FOG0001880
OrthoInspector	1	1.000	-	-		otm49243
Panther	1	1.100	-	-	O	PTHR12822
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1890
SonicParanoid	1	1.000	-	-		X1411
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	13	13.110