DRSC/TRiP Functional Genomics Resources

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Protein Alignment Brms1 and brms1lb

DIOPT Version :9

Sequence 1:NP_572840.1 Gene:Brms1 / 32243 FlyBaseID:FBgn0030434 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_003200736.1 Gene:brms1lb / 562889 ZFINID:ZDB-GENE-081031-54 Length:323 Species:Danio rerio


Alignment Length:236 Identity:92/236 - (38%)
Similarity:148/236 - (62%) Gaps:16/236 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPV----KNGESDGEGDVSGGESEHSNSSQPHDTSDEEEANECDSDDSSELDASEIDRRRAEHIE 61
            |||    :...:..|.||...|.|.|:|    |..|...:...:..|:|::|..:.:|||.|.::
Zfish     1 MPVHPRDRKENNHEEMDVDYPEQEASSS----DEEDSVSSTASEDGDTSDMDDEDCERRRMECLD 61

  Fly    62 DLLSLERQFNELREQYYVERINLIERQLAEVRSGRSEEFVQPQKELDKKYRTRIEVADVLRKYRL 126
            ::.:||:||.:|::..|.||:..::.:|.||.:|.:.|:::|...|.:..:.|.:||.:.|:..|
Zfish    62 EMTNLEKQFTDLKDHLYKERVTQMDLKLQEVMAGSAAEYLEPLATLQENMQIRTKVAGIYRELCL 126

  Fly   127 QNIEHKYQSEEQAAVQHFESEKHMALDNLREEFMERIRRLEEDRHNVDIS---WADWGTDKRQSK 188
            :::.:||:.|.|||.||:||||.:..|.::.|..|:|||||||||::||:   |.| |...|::|
Zfish   127 ESVRNKYECEMQAASQHWESEKLLLFDTVQSELEEKIRRLEEDRHSIDITSELWND-GLQSRKNK 190

  Fly   189 VRGP----GRKKAVTVTGPYVVYMLREEDIMEDWTIIRKAL 225
            .:.|    .:||.|.|:|||:||||::.||:||||.||||:
Zfish   191 KKDPLSPGKKKKPVVVSGPYIVYMLQDLDILEDWTAIRKAM 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Brms1NP_572840.1 Sds3 59..>176 CDD:285764 45/116 (39%)
brms1lbXP_003200736.1 Sds3 59..>175 CDD:285764 44/115 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576428
Domainoid 1 1.000 112 1.000 Domainoid score I6136
eggNOG 1 0.900 - - E1_KOG4466
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9123
Inparanoid 1 1.050 178 1.000 Inparanoid score I4019
OMA 1 1.010 - - QHG49521
OrthoDB 1 1.010 - - D1456563at2759
OrthoFinder 1 1.000 - - FOG0002914
OrthoInspector 1 1.000 - - otm24533
orthoMCL 1 0.900 - - OOG6_105503
Panther 1 1.100 - - O PTHR21964
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1923
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.770

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