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Protein Alignment Brms1 and suds-3
DIOPT Version :9
Sequence 1: | NP_572840.1 |
Gene: | Brms1 / 32243 |
FlyBaseID: | FBgn0030434 |
Length: | 259 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001024114.1 |
Gene: | suds-3 / 3565884 |
WormBaseID: | WBGene00044204 |
Length: | 215 |
Species: | Caenorhabditis elegans |
Alignment Length: | 162 |
Identity: | 32/162 - (19%) |
Similarity: | 63/162 - (38%) |
Gaps: | 19/162 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 GGESEHSNSSQPHDTSDEEEANECDSDDSSELDASEIDRRRAEHIEDLLSLERQFNELREQYYVE 80
||:.:......|......||....: .|...|.:|::.:.:...:..|.|:..||.|....
Worm 11 GGKRDRGTPRLPIRRPPSEEPAPLE-----HLTQEEYERKKTDILRRAVLAESQYIALRTQLRDN 70
Fly 81 RINLIERQLAEVRSGRSEEFVQPQKE----LDKKY-----RTRIEVADVLRKYRLQNIEHKYQSE 136
:........|.|.:|...|.:..::| |.||. :..:::|.:|.:|..:...::.|.|
Worm 71 KFREAREYKANVAAGTDPELLAAKREAEDALSKKLDINQAKYELKMAQILDEYEAETAMNETQHE 135
Fly 137 EQAAVQHFESEKHMALDNLREEFMERIRRLEE 168
:: :...|...:|..:|...|:.:|..|
Worm 136 DK-----YVYAKGRYIDFFKELIAEKEKRERE 162
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Brms1 | NP_572840.1 |
Sds3 |
59..>176 |
CDD:285764 |
24/119 (20%) |
suds-3 | NP_001024114.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
1 | 0.960 |
|
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