DRSC/TRiP Functional Genomics Resources

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Protein Alignment Brms1 and dep1

DIOPT Version :10

Sequence 1:NP_572840.1 Gene:Brms1 / 32243 FlyBaseID:FBgn0030434 Length:259 Species:Drosophila melanogaster
Sequence 2:NP_596582.1 Gene:dep1 / 2540595 PomBaseID:SPBC21C3.02C Length:491 Species:Schizosaccharomyces pombe


Alignment Length:167 Identity:38/167 - (22%)
Similarity:66/167 - (39%) Gaps:45/167 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PVKNGESDGEGD-------VSGGESEHSNSSQPH---DTSDEEEANECDSDDSSELDASEIDR-- 54
            |.|.|...|.|.       ||...|.:|.|....   :||.||...|.....|:...|.|.|.  
pombe   237 PRKGGPRSGVGSRKRKRATVSRKWSTNSESKIKRVALETSQEESDREIADRRSASEQAHEADDEK 301

  Fly    55 --RRAEHIEDLLSLERQFNELREQYYVERINLIERQLAEVRSGRSEEFVQPQKELDKKY------ 111
              :|.|..:.||::|.:|..||.:.|.:::         ::....||.:  |.|..:::      
pombe   302 AIKRKEAFDALLNIETEFTFLRNRLYGKKL---------LKLNEHEEMI--QNETHERFNACIDL 355

  Fly   112 -------RTRIEVADVLRKY-RLQNI------EHKYQ 134
                   |.|:...:::::. .::|:      :.|||
pombe   356 ITERRDDRVRLATENLMKQLGNIKNVMDYVTKQRKYQ 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Brms1NP_572840.1 Sds3 59..>176 CDD:430099 17/96 (18%)
dep1NP_596582.1 Sds3 308..>380 CDD:430099 13/82 (16%)

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