DRSC/TRiP Functional Genomics Resources

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Protein Alignment Brms1 and suds3

DIOPT Version :10

Sequence 1:NP_572840.1 Gene:Brms1 / 32243 FlyBaseID:FBgn0030434 Length:259 Species:Drosophila melanogaster
Sequence 2:XP_002938132.2 Gene:suds3 / 100170178 XenbaseID:XB-GENE-5887379 Length:323 Species:Xenopus tropicalis


Alignment Length:207 Identity:56/207 - (27%)
Similarity:109/207 - (52%) Gaps:26/207 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SDEEEANEC----DSDDSSELDASEIDRRRAEHIEDLLSLERQFNELREQYYVERINLIERQLAE 91
            |.|||.:..    :||:.:| ||||.|..:.::::        :.|::||.|.:::..::|||.:
 Frog    26 SVEEEDDRSFRGRESDEDTE-DASETDIAKHDNVD--------YVEMKEQMYQDKLASLKRQLQQ 81

  Fly    92 VRSGRSEEFVQPQKELDKKYRTRIEVADVLRKYRLQNIEHKYQSEEQAAVQHFESEKHMALDNLR 156
            ::.|..:|:.:..|:||::|:.||..|::..:...:.:|..|..|::|||:.||.:|....:||.
 Frog    82 LQEGTLQEYQKRLKKLDQQYKERIRNAELFLQLETEQVERNYIKEKKAAVKEFEDKKIELKENLI 146

  Fly   157 EEFMERIRRLEEDRHNVDISWADWG-----TDKRQSKVRGP-----GRKKAVTVTGPYVVYMLRE 211
            .|..|:.:.:|.::..::::.....     |.|.:.:...|     .|:|....   .:.|:|.:
 Frog   147 AELEEKKKMIENEKLTMELTGDSMEVKPIMTRKLRRRPNDPVPIPDKRRKPAPA---QLNYLLTD 208

  Fly   212 EDIMEDWTIIRK 223
            |.||||..|:.|
 Frog   209 EQIMEDLRILNK 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Brms1NP_572840.1 Sds3 59..>176 CDD:430099 30/116 (26%)
suds3XP_002938132.2 Sds3 58..>169 CDD:430099 30/118 (25%)

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