DRSC/TRiP Functional Genomics Resources

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Protein Alignment chia.6 and Cht10

DIOPT Version :9

Sequence 1:NP_955897.2 Gene:chia.6 / 322420 ZFINID:ZDB-GENE-030131-1140 Length:480 Species:Danio rerio
Sequence 2:NP_001036422.1 Gene:Cht10 / 3355116 FlyBaseID:FBgn0250907 Length:2286 Species:Drosophila melanogaster


Alignment Length:510 Identity:174/510 - (34%)
Similarity:257/510 - (50%) Gaps:100/510 - (19%)


- Green bases have known domain annotations that are detailed below.


Zfish    22 QLVCYFTNWSQYRPDVGKYMPSNVDPHLCTHLIYAFSIINNENKLTTY---EWN--DETLYQSFN 81
            :::||||||:.||...||::|.::|..||||:||.|::::.:| ||..   .|.  |...|:...
  Fly  1410 KIICYFTNWAWYRQGGGKFLPEDIDSDLCTHIIYGFAVLSRDN-LTIQPHDSWADLDNKFYERIV 1473

Zfish    82 GLKQSNPNLKTLLAVGGWNFGT-TQFSSMVSTPQNRQTFIQSSITFLRTHGFDGLDLDWEYP--- 142
            ..::.  ..|..:|:||||... .::|.:|..|:.|..||::.:.|:..:.|||||||||||   
  Fly  1474 AYRKK--GAKVTVAIGGWNDSAGDKYSRLVRNPEARSRFIRNVLDFIEEYNFDGLDLDWEYPVCW 1536

Zfish   143 --GSRGSPPEDKQRFTLLCKELVEAYQAESAATGRPR-LMLTAAVAAGKGNIDAGYEIAEIAKYL 204
              ..:....|:|..|:.|.:||..|:|        || |:|:|||:..|..||||||:||::.|.
  Fly  1537 QVDCKKGTAEEKIGFSALVRELFYAFQ--------PRGLILSAAVSPNKKVIDAGYEVAELSHYF 1593

Zfish   205 DFINIMTYDFHGSWESVTGHNSPLY---RGSGDIGDKIYYNTDFAMTYWRDQGAPVEKLRMGFAA 266
            .:|::|.||:||.|:..|||.:|:|   .|:.:      :|.:|:|.||...||...||.||...
  Fly  1594 SWISVMAYDYHGQWDKKTGHVAPMYSHPEGTAN------FNANFSMNYWISMGADRRKLVMGIPL 1652

Zfish   267 YGRTFRLSSAVS-GVGAPASGAASAGTYTREAGFWSYYEICTFLKQATVQQIVDQK---VPYATK 327
            ||::|.|:.... .:.||..|...||..||..||.:|||||..::......:.|.|   .|:|..
  Fly  1653 YGQSFSLAETTKHQLNAPTYGGGEAGEATRARGFLAYYEICLKIRHHRWNVVRDTKGRIGPFAYH 1717

Zfish   328 GQEWVGFDNMESYKTKVDYLKEKGFGGAFVWALDLDDFSGQFCGQSKYPLIGQLRTLLN------ 386
            |.:||.||::...:.|.:|:|..|.|||.:||||||||. ..|....|||:..:..:|.      
  Fly  1718 GDQWVSFDDVPMIRHKSEYIKAMGLGGAMIWALDLDDFK-NVCECESYPLLKAINRVLRGFGGPQ 1781

Zfish   387 ----INNTEFPYNPPSTTVKPSGRPTRASATVPYATRPPVVPT--APSGSDF------------- 432
                :.|       |.:|:||:             .:||..||  ||||.:.             
  Fly  1782 PKCLLEN-------PKSTMKPN-------------IKPPFRPTINAPSGPNLDSPTQNVSLNVLS 1826

Zfish   433 --CTGKLEGIYEYPADSMIYIHCANGRTFIQR-CPA-----KTVFDPDCKCCNWP 479
              |..|....:|:  |...|..|.:| |:::| ||.     ||.       |:||
  Fly  1827 IKCHSKNYLAHEW--DCTKYYICEHG-TYVERSCPLGLQWNKTY-------CDWP 1871

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
chia.6NP_955897.2 Glyco_18 22..363 CDD:214753 136/359 (38%)
GH18_chitolectin_chitotriosidase 23..385 CDD:119351 144/380 (38%)
CBM_14 433..479 CDD:279884 14/51 (27%)
Cht10NP_001036422.1 Glyco_18 220..565 CDD:214753
GH18_chitolectin_chitotriosidase 221..586 CDD:119351
ChtBD2 697..737 CDD:214696
CBM_14 801..848 CDD:279884
CBM_14 875..918 CDD:279884
Glyco_18 966..1310 CDD:214753
GH18_chitolectin_chitotriosidase 967..1331 CDD:119351
Glyco_18 1410..1753 CDD:214753 136/359 (38%)
GH18_chitolectin_chitotriosidase 1411..1774 CDD:119351 144/380 (38%)
ChtBD2 1834..1871 CDD:214696 12/46 (26%)
Glyco_18 1909..2253 CDD:214753
GH18_chitolectin_chitotriosidase 1910..2274 CDD:119351
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6443
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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