DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4404 and CG6163

DIOPT Version :10

Sequence 1:NP_572838.2 Gene:CG4404 / 32241 FlyBaseID:FBgn0030432 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_648460.1 Gene:CG6163 / 39274 FlyBaseID:FBgn0036155 Length:428 Species:Drosophila melanogaster


Alignment Length:260 Identity:46/260 - (17%)
Similarity:75/260 - (28%) Gaps:80/260 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KDDPVFN-VRFVQFVENQPCLWNYTHPGYSKKEDVQRAWQQVANDIKDTVRNCRER--WRTIRSS 70
            |:||..| .:.::.::..|.:|:..:..:..:......|.::|......|...:.:  |..::..
  Fly     3 KEDPFVNRAQLLKAIKKYPEIWDSNNKLHMCRSVTSPMWTEIAEQFGGHVPTVKLQSIWSQMKYH 67

  Fly    71 FLRSLKLARTQTGRGKRKYYLSKYLQFLVPFTKSRSCHKQLPGMVLRKPGQAATAQQEDEVVAAE 135
            :...:........|...|:...:.:.|:...|.::....|       ..|.:......|....|.
  Fly    68 YHNLVHRQILHKDRFNTKWEHFEPMSFMYNITVAKIVGAQ-------SSGGSGGGTSSDAPSTAT 125

  Fly   136 EEAKVSDGEMPLDVQVSEEEHRRNQEQDREQPTACLPLRLHSIKVEHDSSNANQQLERMVSQQSL 200
            |.|.|  ||.|                  ..|.|..||                           
  Fly   126 EAATV--GEEP------------------AAPVAPPPL--------------------------- 143

  Fly   201 VSVPAAALGNHLGWSDLTQWFKGHGSGHHKLTTTTTTPTSP--------PPPPQPATSALSVFTG 257
               |.|..|            :|..||......|.||||:|        ||..|......:.|||
  Fly   144 ---PTATHG------------RGRPSGSFSWLQTATTPTAPQLPHLITQPPHSQGHGMTYTAFTG 193

  Fly   258  257
              Fly   194  193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4404NP_572838.2 MADF 17..103 CDD:214738 9/87 (10%)
BESS 267..301 CDD:460758
CG6163NP_648460.1 MADF 12..98 CDD:214738 9/85 (11%)
MADF 226..316 CDD:214738
Blue background indicates that the domain is not in the aligned region.

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