DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4404 and madf-8

DIOPT Version :9

Sequence 1:NP_572838.2 Gene:CG4404 / 32241 FlyBaseID:FBgn0030432 Length:308 Species:Drosophila melanogaster
Sequence 2:NP_497739.1 Gene:madf-8 / 183517 WormBaseID:WBGene00008118 Length:300 Species:Caenorhabditis elegans


Alignment Length:138 Identity:27/138 - (19%)
Similarity:60/138 - (43%) Gaps:18/138 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DPVFNVRFVQFVENQPCLWNYTHPGYSKKEDVQRAWQQ----VANDIKDTVRNCRERWRTIRSSF 71
            :.|:::  :..|..:|.||:.....:......:|||.|    :..|.:..:...::.|::.|..|
 Worm   131 EKVYDI--IYAVRKRPILWDQRLICHRNSNLSRRAWDQLDLELGIDEEYPLARRKQIWKSKRDYF 193

  Fly    72 LRSLKLARTQTGRGKRKYYLSKYLQFLVPFTKSRSCHKQLPGMVLRKPGQAATAQQEDEVVAAEE 136
            :.::..|..      ||:..:..|:|..|....|:.....|  .:.:|.|:.    .|::|.|::
 Worm   194 VSAVNAANL------RKWIYADALEFYRPMINFRTTFCLRP--TVAQPSQSV----HDKLVLADK 246

  Fly   137 EAKVSDGE 144
            ..:.:.|:
 Worm   247 NIQCTPGD 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4404NP_572838.2 MADF 17..103 CDD:214738 18/89 (20%)
BESS 267..301 CDD:281011
madf-8NP_497739.1 MADF 135..219 CDD:214738 18/91 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156211
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12243
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.030

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