DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXC8 and exex

DIOPT Version :10

Sequence 1:NP_073149.1 Gene:HOXC8 / 3224 HGNCID:5129 Length:242 Species:Homo sapiens
Sequence 2:NP_648164.1 Gene:exex / 38884 FlyBaseID:FBgn0041156 Length:525 Species:Drosophila melanogaster


Alignment Length:128 Identity:47/128 - (36%)
Similarity:68/128 - (53%) Gaps:28/128 - (21%)


- Green bases have known domain annotations that are detailed below.


Human   127 GHLNQNSSPS-LMFPWMR---------------PHAP--GR-RSGRQTYSRYQTLELEKEFLFNP 172
            ||   |..|| |.|.::.               ||..  |: |..|..::..|.|||||:|..|.
  Fly   401 GH---NFMPSQLQFEFLARAGMLHHRIPELAAYPHHAILGKTRRPRTAFTSQQLLELEKQFKQNK 462

Human   173 YLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGARDEEKVEEEGNEEEEKEEE 235
            ||:|.:|.||:..|.|:|.||||||||||||||:...      |:.|.|...:.|::::::::
  Fly   463 YLSRPKRFEVASGLMLSETQVKIWFQNRRMKWKRSKK------AQQEAKERAKANQQQQQQQQ 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXC8NP_073149.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..154 11/45 (24%)
Antp-type hexapeptide 138..143 1/4 (25%)
Homeodomain 150..206 CDD:459649 32/55 (58%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 206..242 4/30 (13%)
exexNP_648164.1 Homeodomain 440..496 CDD:459649 32/55 (58%)

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