DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXC8 and Dbx

DIOPT Version :10

Sequence 1:NP_073149.1 Gene:HOXC8 / 3224 HGNCID:5129 Length:242 Species:Homo sapiens
Sequence 2:NP_647677.2 Gene:Dbx / 38254 FlyBaseID:FBgn0261723 Length:741 Species:Drosophila melanogaster


Alignment Length:293 Identity:68/293 - (23%)
Similarity:98/293 - (33%) Gaps:101/293 - (34%)


- Green bases have known domain annotations that are detailed below.


Human     3 SYFVNPLFSKYKAGESLEPAYYDCRFPQSVGRSHALVYGPG----------GSAPG---FQHASH 54
            ::|.:|.|..::.     |.:...:..|.|.:.|     ||          .|:||   ....::
  Fly   239 AHFPHPAFLTHQL-----PPHQHHQQQQHVQQQH-----PGNSCQPQTASSSSSPGSTISDSDNN 293

Human    55 HVQDFFHHGTSGISNSGYQQNPCSLSC-----HGDASKFYGYEALPRQSLYGAQQEASVVQYPDC 114
            |.....:...||..|||....|..|:.     ...||:....:...:|.|.||            
  Fly   294 HGASTANGNGSGTGNSGQDARPHELANSNPDEDSSASRRLTQDKQQQQQLLGA------------ 346

Human   115 KSSANTNSSEGQGH-------------------------------LNQNSSPSLM---------- 138
               ..|....|.||                               ||.....||:          
  Fly   347 ---GGTGGGGGGGHGHGHPTPPPPPPPPVIAKPMPSRPTPFLPHTLNHPHLHSLLAHCRNPYMSV 408

Human   139 ------------FPWMRPHAPGRRSG---RQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGL 188
                        |||........|.|   |..:|..|...|||.|....|:::..|.:::..|||
  Fly   409 GAQVFPLPPGQGFPWAHSTRGKPRRGMMRRAVFSDSQRKGLEKRFQQQKYISKPDRKKLAERLGL 473

Human   189 TERQVKIWFQNRRMKWKKENNKDKLP--GARDE 219
            .:.|||||||||||||:....::.|.  |:||:
  Fly   474 KDSQVKIWFQNRRMKWRNSKERELLASGGSRDQ 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXC8NP_073149.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..154 13/95 (14%)
Antp-type hexapeptide 138..143 3/26 (12%)
Homeodomain 150..206 CDD:459649 27/58 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 206..242 4/16 (25%)
DbxNP_647677.2 Homeodomain 437..491 CDD:459649 25/53 (47%)

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