DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXC8 and inv

DIOPT Version :10

Sequence 1:NP_073149.1 Gene:HOXC8 / 3224 HGNCID:5129 Length:242 Species:Homo sapiens
Sequence 2:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster


Alignment Length:333 Identity:70/333 - (21%)
Similarity:107/333 - (32%) Gaps:149/333 - (44%)


- Green bases have known domain annotations that are detailed below.


Human    37 ALVYGPGGSAPGFQ---------HASHHVQDFFHH------------------------------ 62
            ||..||||:....|         |..||:|:..::                              
  Fly   234 ALGLGPGGAVHPHQQLLLQRDQVHHHHHMQNHLNNNENLHERALKFSIDNILKADFGSRLPKIGA 298

Human    63 -----GTSGISNSGYQQNPCSLSCHGDASKFYGYEALPRQS---LYGAQQEA---SVVQYPD--- 113
                 |...:|.|....:..|.:.:|:.|..    ..|::|   |..||..|   |.:.:..   
  Fly   299 LSGNIGGGSVSGSSTGSSKNSGNTNGNRSPL----KAPKKSGKPLNLAQSNAAANSSLSFSSSLA 359

Human   114 --CKSSANTNSSE-----------------------------GQGHLNQNSSPSLMFP-WM---- 142
              |.:|.::||:.                             ..|...::|...:::| |:    
  Fly   360 NICSNSNDSNSTATSSSTTNTSGAPVDLVKSPPPAAGAGATGASGKSGEDSGTPIVWPAWVYCTR 424

Human   143 --------------RPHAPGRRSG--------------------------RQTYSRYQTLELEKE 167
                          :|..|...|.                          |..:|..|...|:.|
  Fly   425 YSDRPSSGRSPRARKPKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARLKHE 489

Human   168 FLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKEN----------------NKDKLPGA 216
            |..|.|||.|||.::|..|||.|.|:||||||:|.|.||.:                |...:|..
  Fly   490 FNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKSSGTKNPLALQLMAQGLYNHSTIPLT 554

Human   217 RDEEKVEE 224
            |:||:::|
  Fly   555 REEEELQE 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXC8NP_073149.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..154 11/113 (10%)
Antp-type hexapeptide 138..143 2/23 (9%)
Homeodomain 150..206 CDD:459649 28/81 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 206..242 7/35 (20%)
invNP_523699.3 Homeodomain 472..528 CDD:459649 27/55 (49%)
Engrail_1_C_sig 529..554 CDD:431338 2/24 (8%)

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