DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq8 and AT1G71810

DIOPT Version :9

Sequence 1:NP_572836.1 Gene:Coq8 / 32239 FlyBaseID:FBgn0052649 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_565025.1 Gene:AT1G71810 / 843511 AraportID:AT1G71810 Length:692 Species:Arabidopsis thaliana


Alignment Length:508 Identity:119/508 - (23%)
Similarity:186/508 - (36%) Gaps:128/508 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 PATKSNQTMPKKETSTNPGIITQDTEYVNNVLRFVAGAKVEEQPP--DAQPKKKSDQPAIEVPEL 220
            |:.:.|..:.....|.:....|..:.|:.::....|.:..|...|  |...|||           
plant    28 PSRRGNSAVVVSAASRDVDSFTSKSGYLFSLSADEADSLSEYNFPRIDGMYKKK----------- 81

  Fly   221 SKVAKQRKVPSSRIGRMASFGGLFA---GLGLGTLNELTKGALGLGGSTSMREALLSPANAERIV 282
                     |...:.|:|..|..|:   ||.|..                  |||      || .
plant    82 ---------PLILLRRLAQIGTTFSYWFGLRLAD------------------EAL------ER-S 112

  Fly   283 DTLCKVRGAALKIGQILSIQDSSVVSPQLAKAFERVRQAADYMPD-------------------W 328
            |.:.|||.|.|:  ::|         .:|..|:.::.||....||                   :
plant   113 DQMFKVRAAELR--KLL---------VELGPAYVKIAQAVSSRPDLIPPIYLDELSLLQDQITPF 166

  Fly   329 QVERVMN---TQLGADWRQRLKSFEDKPFAAASIGQVHRATL-SDGMDVAIKIQYPGVAQSIESD 389
            ..|...|   .:||....:.......:|.||||:|||::|.| ..|..||:|:|.|||..:|..|
plant   167 STEVAFNMIEDELGLPIDELFSEISPEPVAAASLGQVYQARLRRSGKVVAVKVQRPGVRAAIALD 231

  Fly   390 ---IDNLVGMLKVWDVFPQGFFIDNVVRVAKRELQW------EVDYDREAEYTEKFREMIAPYPE 445
               :..:.|::|     ..|.|..::..|..   :|      |:||..||:...|||::.....:
plant   232 TLILRYIAGLIK-----KAGRFNSDLEAVVD---EWATSLFKEMDYLNEAQNGIKFRKLYGGIKD 288

  Fly   446 YYVPRVVRDLTTSSVLTTELVPGVPLDKCFDLSYEHRRHIAASVLKLCLRELFEIECMQTDPNWS 510
            ..||::..:.:||.||..|.|.|..|::..||      ::....:.....:|.|......||:..
plant   289 VLVPKMYTEYSTSKVLVMEWVEGQKLNEVNDL------YLVEVGVYCSFNQLLEYGFYHADPHPG 347

  Fly   511 NFL--YDAPSRRLMLIDFGSTRFYRHEFIRNYRRVIMSAAENNRQGVLEMSREMGFL-----TGY 568
            |||  ||.   :|..:|||....:|.|....:....:.....:.:.:.:....:|.|     ...
plant   348 NFLRTYDG---QLAYLDFGMMGDFRPELRDGFMEACLHLVNRDFKALAKDFVTLGLLPPTAEKSA 409

  Fly   569 ETKQMEQAHVDAVMILGEIFRYDGDFDFGRQNTTERLAALVPTMVAHRLCPPP 621
            .||.:.....||      |.|...:..||     :.|..|..||...:...||
plant   410 VTKALTDVFQDA------ISRGVRNISFG-----DLLGDLGKTMYRFKFRIPP 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq8NP_572836.1 AarF 262..641 CDD:223733 99/399 (25%)
ABC1_ADCK3 313..563 CDD:270872 70/283 (25%)
AT1G71810NP_565025.1 UbiB 66..497 CDD:273909 113/470 (24%)
ABC1_ADCK3-like 159..395 CDD:270691 65/252 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0661
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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