DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq8 and AT1G11390

DIOPT Version :9

Sequence 1:NP_572836.1 Gene:Coq8 / 32239 FlyBaseID:FBgn0052649 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_172606.3 Gene:AT1G11390 / 837681 AraportID:AT1G11390 Length:624 Species:Arabidopsis thaliana


Alignment Length:472 Identity:99/472 - (20%)
Similarity:179/472 - (37%) Gaps:96/472 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 PAIEVPELSKVAKQRKVPSSRIGRMASFGGLFAGLGLG------TLNELTKGALGLGGSTSMREA 271
            |.|......:||..::.|.|.|...||...|:.....|      .|..:.:|.:.:|.:..: ..
plant   126 PGIVAVTCGQVAWAQRAPGSGINHYASDKSLYTRAKNGPIFLSSLLFSVIEGFILIGRAFYI-AC 189

  Fly   272 LLSPAN-----------------AERIVDTLCKVRGAALKIGQILSIQDS---SVVSPQLAKAFE 316
            |.:|..                 .|.:..||.:...|.:|.||..:.:..   ..:..||:|...
plant   190 LFTPTILMGLVVESCGPRFRKIWLEMVHRTLERAGPAFIKWGQWAATRPDLFPKDLCSQLSKLHS 254

  Fly   317 RVRQAADYMPDWQVERVMNTQLGADWRQRLKSFEDKPFAAASIGQVHRATL--------SDGMDV 373
            ...:.:.......:|:....:|.    :..:.|::.|.|:.||.|||||:|        |....|
plant   255 NAPEHSFAYTKKTIEKAFGRKLS----EIFEEFDEVPVASGSIAQVHRASLRFQYPGQKSKSSLV 315

  Fly   374 AIKIQYPGVAQSIESD--IDNLVGMLKVWDVFP--QGFFIDNVVRVAKRELQWEVDYDREAEYTE 434
            |:|:::|||.:||..|  |.|||.  |:..:.|  :...:|..|:.....:..:||..|||.:..
plant   316 AVKVRHPGVGESIRRDFVIINLVA--KISTLIPALKWLRLDESVQQFGVFMLSQVDLAREASHLS 378

  Fly   435 KFREMIAPYPEYYVPRVVRDLTTSSVLTTELVPGVPLDKCFDLSYEHR------RHIAA-SVLKL 492
            :|......:.:...|:.|..|...:||......|..:.:..|....|.      .||.. ::||:
plant   379 RFIYNFRRWKDVSFPKPVYPLVHPAVLVETYEHGESVARYVDGMEGHEWIKTRLAHIGTHALLKM 443

  Fly   493 CLRELFEIECMQTDPNWSNFLYDAPSRR----------LMLIDFGSTRFYRHEFIRNYRRVIMSA 547
            .|.:.|    :..|.:..|.|....:.|          ::.:|.|.|               ...
plant   444 LLVDNF----IHADMHPGNILVRKKASRGGLFKTKKPHIVFLDVGMT---------------AEL 489

  Fly   548 AENNRQGVLE----MSREMGFLTGYETKQME--------QAHVDAVMILGEIFRYDGDFDFGRQN 600
            |:|:|:.:|:    ::|..|......|.::.        :|.::.|   .|.|::.|..:....:
plant   490 AKNDRENLLDFFKAVARRDGRTAAERTLKLSRKQNCPNPEAFIEEV---EEAFKFWGTPEGDLVH 551

  Fly   601 TTERLAALVPTMVAHRL 617
            ..:.:..|:..:..||:
plant   552 PADCMHELLEKVRRHRV 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq8NP_572836.1 AarF 262..641 CDD:223733 86/417 (21%)
ABC1_ADCK3 313..563 CDD:270872 64/282 (23%)
AT1G11390NP_172606.3 ADCK2-like 251..542 CDD:270873 70/318 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0661
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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