DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq8 and ABC1

DIOPT Version :9

Sequence 1:NP_572836.1 Gene:Coq8 / 32239 FlyBaseID:FBgn0052649 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_192075.1 Gene:ABC1 / 828127 AraportID:AT4G01660 Length:623 Species:Arabidopsis thaliana


Alignment Length:646 Identity:238/646 - (36%)
Similarity:358/646 - (55%) Gaps:73/646 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 WSNSSIRELIAENVAHTQQLVRSSSQNPTEELKK-----LQQTVKETGERGYVVAK---GICS-- 88
            ||.|..|      :.:...||.....|.:.||::     |:..:..:|::..|.|.   |:.|  
plant     4 WSKSFTR------LVNGVSLVAKEIYNQSPELQRARNGDLEGLITSSGKKALVAATDLVGLTSGK 62

  Fly    89 LLETKIKMSREESAISEPAQVSSIRKSTPTAQNPASWDAANLDISSITLQEFEEILSRRNKDRSV 153
            |.|..|:.|:|.|.:                                   .|:|   ..|||..|
plant    63 LRELSIRRSKEPSVV-----------------------------------YFDE---GDNKDNVV 89

  Fly   154 SLRTPATKSNQTMPKKETSTNPGIITQDTEYVNNVLR----FVAGAKVEE----QPPDAQPKKKS 210
            :  ||..:|..|.|.::...:..:..:.::.|.|..|    .|:|.:..|    :..::....::
plant    90 A--TPEVRSVNTKPSEKIVDSKVLRNEFSDEVKNSNREGEIKVSGVEAGEIIGVRAVESGTVTEA 152

  Fly   211 DQPAIEVPELS-KVAKQRKVPSSRIGRMASFGGLFAGLGLGTLNELT----KGALGLGGSTSMRE 270
            ..|:..||.:. :..::|||||:.:.|...|..|.|.|..|.:.|.|    .|......:.....
plant   153 SSPSEVVPPVKRRRPRERKVPSTPMARAYGFFNLGAALAWGAVKESTYRMVNGTPMTPDNQPALS 217

  Fly   271 ALLSPANAERIVDTLCKVRGAALKIGQILSIQDSSVVSPQLAKAFERVRQAADYMPDWQVERVMN 335
            :|:|..||||:...||::||||||:||:|||||.|:|...:..|.|.|||.||.||..|:..|::
plant   218 SLMSKENAERLALGLCEMRGAALKVGQMLSIQDESLVPAPILNALEYVRQGADVMPRSQLNPVLD 282

  Fly   336 TQLGADWRQRLKSFEDKPFAAASIGQVHRATLSDGMDVAIKIQYPGVAQSIESDIDNLVGMLKVW 400
            .:||::|:.:|.||:.:|.|||||||||||...||::||:||||||||.||||||:|:..:|...
plant   283 AELGSNWQSKLTSFDYEPLAAASIGQVHRAVTKDGLEVAMKIQYPGVANSIESDIENVRRLLNYT 347

  Fly   401 DVFPQGFFIDNVVRVAKRELQWEVDYDREAEYTEKFREMIAPYPEYYVPRVVRDLTTSSVLTTEL 465
            ::.|:|.|:|..::|||.||..|.||:.||...::||::::..|.:|||.||.:.::..:|||||
plant   348 NLIPKGLFLDRAIKVAKEELAQECDYEIEAVSQKRFRDLLSDTPGFYVPLVVDETSSKKILTTEL 412

  Fly   466 VPGVPLDKCFDLSYEHRRHIAASVLKLCLRELFEIECMQTDPNWSNFLYDAPSRRLMLIDFGSTR 530
            :.|:|:||...|..:.|.::...:|:|.|:|||....|||||||.||||:..::.:.|||||:.|
plant   413 ISGIPIDKVALLDQKTRDYVGRKMLELTLKELFVFRFMQTDPNWGNFLYNEATKTINLIDFGAAR 477

  Fly   531 FYRHEFIRNYRRVIMSAAENNRQGVLEMSREMGFLTGYETKQMEQAHVDAVMILGEIFRYDGDFD 595
            .|..:|:.:|.|::|:.||.:.:||:||||.:|||||.|:..|..|||.|..|:|..|...|.:.
plant   478 DYPKKFVDDYLRMVMACAEKDSEGVIEMSRRLGFLTGDESDVMLDAHVQAGFIVGLPFAEPGGYA 542

  Fly   596 FGRQNTTERLAALVPTMVAHRLCPPPEEIYSIHRKLSGIFLLCARLNVRMNCVPFYKDIVL 656
            |...|....::.|..||:.|||.|||:|.||:||||||.||.|.:|...:.|    :|::|
plant   543 FRTNNIASSISNLGATMLKHRLSPPPDEAYSLHRKLSGAFLACIKLGATVPC----RDLLL 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq8NP_572836.1 AarF 262..641 CDD:223733 179/378 (47%)
ABC1_ADCK3 313..563 CDD:270872 118/249 (47%)
ABC1NP_192075.1 AarF 222..606 CDD:223733 181/382 (47%)
ABC1_ADCK3 260..510 CDD:270872 118/249 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 181 1.000 Domainoid score I1038
eggNOG 1 0.900 - - E1_COG0661
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H86731
Inparanoid 1 1.050 387 1.000 Inparanoid score I511
OMA 1 1.010 - - QHG53666
OrthoDB 1 1.010 - - D525494at2759
OrthoFinder 1 1.000 - - FOG0001764
OrthoInspector 1 1.000 - - oto3745
orthoMCL 1 0.900 - - OOG6_101512
Panther 1 1.100 - - LDO PTHR43851
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1120
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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