DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq8 and AT3G24190

DIOPT Version :9

Sequence 1:NP_572836.1 Gene:Coq8 / 32239 FlyBaseID:FBgn0052649 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_566745.1 Gene:AT3G24190 / 822005 AraportID:AT3G24190 Length:793 Species:Arabidopsis thaliana


Alignment Length:481 Identity:114/481 - (23%)
Similarity:186/481 - (38%) Gaps:111/481 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 QEFEEILSRRNKDRSVSLRTPAT--KSNQTMPKKETSTNPGIITQDTEYV--NNVLRFVAGAKVE 198
            :.|...:..||| ||..:...||  |..||.|.|.|:.|..........|  |||...:.....|
plant    24 RSFVSGIPHRNK-RSRQILAVATDPKPTQTSPPKSTTVNGSSSPSSASKVVNNNVSTRINDVSKE 87

  Fly   199 EQPPDAQPKK----------------------------------KSDQ--PAIEVPELSKV--AK 225
            .:...||.::                                  :|.:  |.:..||....  .|
plant    88 IKRVRAQMEEDEQLSVLMRGLRGQNLKDSVFADDNIQLRLVETGESSEFLPLVYDPETISAYWGK 152

  Fly   226 QRKVPSSRIGRMASFGGLFAGLGLGTL-------NELTKGALGLGGSTSMREALLSPANAERIVD 283
            :.:..:||:.::.|..|.|.....|.:       ||:.:       :..:||.:.|         
plant   153 RPRAVASRVIQLLSVAGGFLSRIAGDVINKKVKENEVAR-------AIELREIVTS--------- 201

  Fly   284 TLCKVRGAALKIGQILSIQDSSVVSPQLAKAFERVRQAADYMPDWQVERVMNTQLGADWRQRLKS 348
                :..|.:|:||.|||: ..::||......:::.......||.....::..:||..|......
plant   202 ----LGPAYIKLGQALSIR-PDILSPAAMTELQKLCDKVPSYPDDVAMALIEEELGKPWYDVYSE 261

  Fly   349 FEDKPFAAASIGQVHRATLSDGMD-VAIKIQYPGVAQSIESD---IDNLVGMLKVWDVFPQGFFI 409
            ....|.||||:|||::..|.:..| ||:|:|.|.|.:::..|   |.||...|:   .||| ..:
plant   262 LSPSPIAAASLGQVYKGRLKENGDLVAVKVQRPFVLETVTVDLFVIRNLGLFLR---KFPQ-VSV 322

  Fly   410 DNVVRVAKRELQW------EVDYDREAEYTEKFREMI-APYPEYYVPRVVRDLTTSSVLTTELVP 467
            |.|..|.    :|      |:||..|.|....|.||: ...|:..||:..:..|:..||||..:.
plant   323 DVVGLVD----EWAARFFEELDYVNEGENGTYFAEMMKKDLPQVVVPKTYQKYTSRKVLTTSWID 383

  Fly   468 GVPLDKCFDLSYEHRRHIAASVLKLC-LRELFEIECMQTDPNWSNFLYDAPSRRLMLIDFGSTRF 531
            |..|.:    |.|.......:|..:| |::|.:......||:..|.: ..|..:|.::|||    
plant   384 GEKLSQ----SIESDVGELVNVGVICYLKQLLDTGFFHADPHPGNMI-RTPDGKLAILDFG---- 439

  Fly   532 YRHEFIRNYRRVIMSAAENNRQGVLE 557
                       ::....::.:.|::|
plant   440 -----------LVTKLTDDQKYGMIE 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq8NP_572836.1 AarF 262..641 CDD:223733 79/308 (26%)
ABC1_ADCK3 313..563 CDD:270872 67/257 (26%)
AT3G24190NP_566745.1 AarF 141..578 CDD:223733 90/363 (25%)
ABC1_ADCK3-like 230..471 CDD:270691 67/253 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0661
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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