DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq8 and Coq8a

DIOPT Version :9

Sequence 1:NP_572836.1 Gene:Coq8 / 32239 FlyBaseID:FBgn0052649 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_001013203.1 Gene:Coq8a / 360887 RGDID:1308245 Length:649 Species:Rattus norvegicus


Alignment Length:637 Identity:273/637 - (42%)
Similarity:376/637 - (59%) Gaps:63/637 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LKKLQQTVKET-------GERGYVVAKGICSLLETKIKM---------SREESAISEPAQ--VSS 111
            |.||.|...||       |....:.|:.:.|....:|.|         ..|:|..:|..:  .:.
  Rat    15 LAKLTQAAVETHLQNLGLGGELILAARALQSTAVEQISMVFGKVQGQDKHEDSYATENFEDLEAE 79

  Fly   112 IRKSTPTA--QNPASWDAANLDISSITLQEFEEILSRRNKD-------RSVSLRTPATKSNQTMP 167
            ::.|||.|  .:|....|::||      |.....|...:::       .|...|........|.|
  Rat    80 VQFSTPQAAGSSPDFSTASSLD------QPLSSSLGHAHREGPAPAYVSSGPFREAGLSGQATSP 138

  Fly   168 KKETSTNPGIITQDTEYVNNVLRF--------VAGAKVEE--------QPPDAQPKKKSDQPAIE 216
            ....:....:..:|....|::.|.        |.|...|:        ..|:::|.|:.      
  Rat   139 LGRVNGRLFVDCRDLFLANSIQRRFFHQDQAPVGGLTAEDIEKARQAKARPESKPHKQM------ 197

  Fly   217 VPELSKVAKQRKVPSSRIGRMASFGGLFAGLGLGTLNELTKGALGLGGSTSMREAL-----LSPA 276
               ||:.|::||||.:||||:|:||||..|||.|.|.|:.|.:|....||..:..|     ||.|
  Rat   198 ---LSERARERKVPVTRIGRLANFGGLAVGLGFGALAEVAKKSLRSENSTGKKAVLDSSPFLSEA 259

  Fly   277 NAERIVDTLCKVRGAALKIGQILSIQDSSVVSPQLAKAFERVRQAADYMPDWQVERVMNTQLGAD 341
            ||||||.|||||||||||:||:|||||.:.::|.|||.||||||:||:||..|:.:.:|..||..
  Rat   260 NAERIVSTLCKVRGAALKLGQMLSIQDDAFINPHLAKIFERVRQSADFMPLKQMTKTLNNDLGPH 324

  Fly   342 WRQRLKSFEDKPFAAASIGQVHRATLSDGMDVAIKIQYPGVAQSIESDIDNLVGMLKVWDVFPQG 406
            ||.:|:.||::|||||||||||.|.|..|.:||:|||||||||||.||::||:.:|.:.::.|:|
  Rat   325 WRDKLEYFEERPFAAASIGQVHLARLKGGREVAMKIQYPGVAQSINSDVNNLMAVLNMSNMLPEG 389

  Fly   407 FFIDNVVRVAKRELQWEVDYDREAEYTEKFREMIAPYPEYYVPRVVRDLTTSSVLTTELVPGVPL 471
            .|.::::.|.:|||..|.||.|||.|.:||||::..:|.:|||.:|.:|.:..||||||:.|.||
  Rat   390 LFPEHLIDVLRRELTLECDYQREAAYAKKFRELLKDHPFFYVPEIVDELCSPHVLTTELITGFPL 454

  Fly   472 DKCFDLSYEHRRHIAASVLKLCLRELFEIECMQTDPNWSNFLYDAPSRRLMLIDFGSTRFYRHEF 536
            |:...||.|.|..|..::|.||||||||...||||||||||.||....::.|:|||:||.|...|
  Rat   455 DQAEGLSQEVRNEICYNILVLCLRELFEFHVMQTDPNWSNFFYDPQQHKVALLDFGATREYDRSF 519

  Fly   537 IRNYRRVIMSAAENNRQGVLEMSREMGFLTGYETKQMEQAHVDAVMILGEIFRYDGDFDFGRQNT 601
            ...|.:||.:||:.:|:.||:.|.||.||||||.|.||.||:||::||||.|..:..||||.|:|
  Rat   520 TDLYIQVIRAAADQDREAVLKKSIEMKFLTGYEVKAMEDAHLDAILILGEAFASEEPFDFGTQST 584

  Fly   602 TERLAALVPTMVAHRLCPPPEEIYSIHRKLSGIFLLCARLNVRMNCVPFYKD 653
            ||::..|:|.|:.|||.|||||.||:|||:.|.||:|::|.....|...:::
  Rat   585 TEKIHNLIPIMLKHRLIPPPEETYSLHRKMGGSFLICSKLKACFPCKAMFEE 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq8NP_572836.1 AarF 262..641 CDD:223733 210/383 (55%)
ABC1_ADCK3 313..563 CDD:270872 130/249 (52%)
Coq8aNP_001013203.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 84..125 10/46 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..203 5/28 (18%)
KxGQ motif. /evidence=ECO:0000250|UniProtKB:Q8NI60 277..280 1/2 (50%)
ABC1_ADCK3 296..546 CDD:270872 130/249 (52%)
AAAS motif. /evidence=ECO:0000250|UniProtKB:Q8NI60 338..341 2/2 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 217 1.000 Domainoid score I2598
eggNOG 1 0.900 - - E1_COG0661
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 473 1.000 Inparanoid score I1443
OMA 1 1.010 - - QHG53666
OrthoDB 1 1.010 - - D128317at33208
OrthoFinder 1 1.000 - - FOG0001764
OrthoInspector 1 1.000 - - otm44424
orthoMCL 1 0.900 - - OOG6_101512
Panther 1 1.100 - - O PTHR43851
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1120
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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