DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq8 and coq8ab

DIOPT Version :9

Sequence 1:NP_572836.1 Gene:Coq8 / 32239 FlyBaseID:FBgn0052649 Length:661 Species:Drosophila melanogaster
Sequence 2:XP_002665174.2 Gene:coq8ab / 327332 ZFINID:ZDB-GENE-030131-5543 Length:567 Species:Danio rerio


Alignment Length:544 Identity:246/544 - (45%)
Similarity:345/544 - (63%) Gaps:51/544 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 RNKDRSVSLRTPATK---------------------SNQTMPKKETSTNP---------GIITQD 181
            |.:.:.||..||..:                     |:|.:.:.....:|         |...||
Zfish    23 RGRQKQVSFLTPQLRGQVSCGHQTALSFSGVMGVFGSDQHLSRLFGKIHPDQQHIYSQIGFFHQD 87

  Fly   182 TEYVNNVLR-FVAGAKVEEQPPDAQPKKKSDQPAIEVPELSKVAKQRKVPSSRIGRMASFGGLFA 245
            ..|.:.:.: .|.|.|.:        .:|.:|      :||:.|::||:|.:||||:.:||||..
Zfish    88 HRYYSALKKEGVKGVKAD--------SRKHNQ------KLSESARERKMPVTRIGRLVNFGGLAV 138

  Fly   246 GLGLGTLNELTKGALGLGGSTSMREALL------SPANAERIVDTLCKVRGAALKIGQILSIQDS 304
            |||:|.:.|:.|.:.....::..::|:|      |.|||||||.|||||||||||:||:|||||.
Zfish   139 GLGIGAIAEVAKKSFASRDNSGQKKAILDSNPFISEANAERIVRTLCKVRGAALKLGQMLSIQDD 203

  Fly   305 SVVSPQLAKAFERVRQAADYMPDWQVERVMNTQLGADWRQRLKSFEDKPFAAASIGQVHRATLSD 369
            :.::|||||.||||||:||:||..|..:::.:.||.:|:..|:.||::|||||||||||.|.:.|
Zfish   204 AFINPQLAKIFERVRQSADFMPAKQTMKMVVSDLGPNWQDHLEYFEERPFAAASIGQVHLARMKD 268

  Fly   370 GMDVAIKIQYPGVAQSIESDIDNLVGMLKVWDVFPQGFFIDNVVRVAKRELQWEVDYDREAEYTE 434
            |.:||:||||||||:||.|||:||:.:|.:....|:|.|.::::.|..|||..|.||.|||:..:
Zfish   269 GREVAMKIQYPGVAKSISSDINNLLTLLSISHALPEGLFPEHLIEVMSRELALECDYIREAKCAK 333

  Fly   435 KFREMIAPYPEYYVPRVVRDLTTSSVLTTELVPGVPLDKCFDLSYEHRRHIAASVLKLCLRELFE 499
            ||::::..:|.:.||.||.:|::..|||||||.|.||||..||..|.:..|...:|.||||||||
Zfish   334 KFQQLLKGHPFFSVPNVVDELSSKHVLTTELVSGFPLDKAEDLPQELKNEICEQILILCLRELFE 398

  Fly   500 IECMQTDPNWSNFLYDAPSRRLMLIDFGSTRFYRHEFIRNYRRVIMSAAENNRQGVLEMSREMGF 564
            ...||||||||||.:|..:.::.|:|||:||.:...|...|..:|.:||:.||:|||:.|.:|.|
Zfish   399 FRYMQTDPNWSNFFFDPQTHKVALLDFGATRGFDASFTDTYIEIIKAAADRNREGVLQRSIDMKF 463

  Fly   565 LTGYETKQMEQAHVDAVMILGEIFRYDGDFDFGRQNTTERLAALVPTMVAHRLCPPPEEIYSIHR 629
            |||||:|.|..|||||||||||.|..|..||||.|:||||:..|:|.|:..||.|||||.||:||
Zfish   464 LTGYESKSMVNAHVDAVMILGEAFSSDEPFDFGSQSTTERIHRLIPVMLKERLTPPPEETYSLHR 528

  Fly   630 KLSGIFLLCARLNVRMNCVPFYKD 653
            |:.|.||:|:||..::.|...:::
Zfish   529 KMGGSFLICSRLKAQICCKNMFQE 552

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq8NP_572836.1 AarF 262..641 CDD:223733 206/384 (54%)
ABC1_ADCK3 313..563 CDD:270872 124/249 (50%)
coq8abXP_002665174.2 ABC1_ADCK3 212..462 CDD:270872 124/249 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 227 1.000 Domainoid score I2435
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 480 1.000 Inparanoid score I1426
OMA 1 1.010 - - QHG53666
OrthoDB 1 1.010 - - D128317at33208
OrthoFinder 1 1.000 - - FOG0001764
OrthoInspector 1 1.000 - - otm25139
orthoMCL 1 0.900 - - OOG6_101512
Panther 1 1.100 - - O PTHR43851
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R9
SonicParanoid 1 1.000 - - X1120
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.970

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