DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Coq8 and Adck2

DIOPT Version :9

Sequence 1:NP_572836.1 Gene:Coq8 / 32239 FlyBaseID:FBgn0052649 Length:661 Species:Drosophila melanogaster
Sequence 2:XP_008761004.1 Gene:Adck2 / 312258 RGDID:1311058 Length:641 Species:Rattus norvegicus


Alignment Length:578 Identity:104/578 - (17%)
Similarity:188/578 - (32%) Gaps:191/578 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 RFV-AGAKVEEQPPDAQPKKKSDQPAIEVPELSKVAKQRKVPSSRIGRMASFGGLFAG------L 247
            :|: |...|.|..|.:..::|:....:....|.|||::.  |.:|| .:....||.||      |
  Rat    49 KFISAQGSVGEAAPGSLCQRKTHWSNLPENGLVKVAQEG--PLARI-LLCLCLGLRAGVLLAKFL 110

  Fly   248 GLGTLNELTKGALGLGGSTSMREALLSPANAERIVDTLCKVRGAA----LKIGQILSIQDSSVVS 308
            .|..|..||               .|:|..:...:..|.|....:    :|:||..|.: ..:.|
  Rat   111 PLLFLYPLT---------------YLAPGFSTLWLHLLFKATETSGPTYIKLGQWASTR-RDLFS 159

  Fly   309 PQLAKAFERVRQAADYMPDWQVERVMNTQLGADWRQRLKSFEDKPFAAASIGQVHRA-------- 365
            ......|.::.......|..:.|.::....|.||...|.....:|..:..:.||::|        
  Rat   160 EAFCVQFSKLHVQVTPHPWARTEYLLQQAFGEDWHSILFFETQEPVGSGCVAQVYKAFANISLLE 224

  Fly   366 ---------------------------------TLSDG--------------------------- 370
                                             .|:|.                           
  Rat   225 KGRIWRLGELSVPGTGTVGTQRDPFMKDWRPSENLADETFIEKLLLPKADLVRSEVGVSQAPGQP 289

  Fly   371 ------MDVAIKIQYPGVAQSIESDI------DNLVGMLK--VWDVFPQGFFIDNVVRVAKRELQ 421
                  :.||:|:.:||:...:..|:      ...:|::.  .|...|:      :|...::.:.
  Rat   290 PKSDHLIPVAVKVLHPGLLSQVYIDLLLMKIGSQALGLIPGVKWLSLPE------IVEEFEKLMV 348

  Fly   422 WEVDYDREAEYTEKFREMI-----APYPEYYVPRVVRDLTTSSVLTTELVP-------GVPLDKC 474
            .:.|...||:..|.|:...     ..:|....|.:.||:...:.  .|.||       |||.|. 
  Rat   349 QQTDLRYEAQNLEHFQHNFQNMASVKFPTPLHPLITRDILVETY--EESVPVSSYQQAGVPTDL- 410

  Fly   475 FDLSYEHRRHIAASVLKLCLRELFEIECMQTDPNWSNFL--------------------YD---- 515
                   :|.||...:.:..:.:|....:..|.:..|.|                    ||    
  Rat   411 -------KRKIAQLGINMLFKMIFVDNFVHGDLHPGNILVQGADGVSSSLEMQQQQVDVYDTLVA 468

  Fly   516 --APS---RRLMLIDFGSTRFYRHEFIRNYRRVIMSAAENNRQGVLEMSREMGFLTGYETKQMEQ 575
              ||:   .||:|:|.|.....:...:||:|.|.::.|......|.|:.  :......|.|.:|:
  Rat   469 TIAPALCPLRLVLLDAGIVAKLQASDLRNFRAVFLAVAMGQGHRVAELM--LHHAQANECKDVEK 531

  Fly   576 AHVDAVMILGEIFRYDGDFDFGRQNT--------TERLAALVPTMVAHRL--CPPPEE 623
            ...:...::.:          .|:||        :..|:::...::.|::  |.|..|
  Rat   532 FKAEMATLVTQ----------ARKNTLTLEKLHVSSLLSSVFKLLMTHKILSCIPRSE 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq8NP_572836.1 AarF 262..641 CDD:223733 82/499 (16%)
ABC1_ADCK3 313..563 CDD:270872 62/372 (17%)
Adck2XP_008761004.1 AarF 133..>518 CDD:223733 69/403 (17%)
ADCK2-like 168..543 CDD:270873 64/402 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0661
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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