DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq8 and Coq8b

DIOPT Version :9

Sequence 1:NP_572836.1 Gene:Coq8 / 32239 FlyBaseID:FBgn0052649 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_001012065.1 Gene:Coq8b / 308453 RGDID:1311356 Length:528 Species:Rattus norvegicus


Alignment Length:438 Identity:232/438 - (52%)
Similarity:314/438 - (71%) Gaps:3/438 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   218 PELSKVAKQRKVPSSRIGRMASFGGLFAGLGLGTLNELTKGALGLGGSTSMR--EALLSPANAER 280
            |:||..:::||||:|||.|:||||||..|||||.|.|:||.:|. |||....  ...|:.|||||
  Rat    74 PQLSDRSRERKVPASRISRLASFGGLAVGLGLGALAEVTKKSLP-GGSLQHEGSSPFLTEANAER 137

  Fly   281 IVDTLCKVRGAALKIGQILSIQDSSVVSPQLAKAFERVRQAADYMPDWQVERVMNTQLGADWRQR 345
            ||.|||.||||||||||:|||||:|::||||.:.||||||:||:||.||:.:|:..:||.||:.:
  Rat   138 IVQTLCTVRGAALKIGQMLSIQDNSLISPQLQRVFERVRQSADFMPRWQMMKVLEEELGKDWQDK 202

  Fly   346 LKSFEDKPFAAASIGQVHRATLSDGMDVAIKIQYPGVAQSIESDIDNLVGMLKVWDVFPQGFFID 410
            :.|.|:.|||||||||||:..|.||.:||:||||||||:||:||:.||:.:||:....|:|.|.:
  Rat   203 VASLEEVPFAAASIGQVHQGVLKDGTEVAVKIQYPGVAESIQSDVQNLLALLKMSVGLPEGLFAE 267

  Fly   411 NVVRVAKRELQWEVDYDREAEYTEKFREMIAPYPEYYVPRVVRDLTTSSVLTTELVPGVPLDKCF 475
            ..::..::||.||.||.|||...:.|::::|..|.:.||.||.:|.|:.||..||..|:|||:|.
  Rat   268 QSLQTLQQELAWECDYRREAACAQTFKKLLADDPFFRVPAVVEELCTTRVLGMELAGGIPLDQCQ 332

  Fly   476 DLSYEHRRHIAASVLKLCLRELFEIECMQTDPNWSNFLYDAPSRRLMLIDFGSTRFYRHEFIRNY 540
            .||.:.|..|...:|:||||||||...|||||||:||||||.|.::.|:|||::|.:..||..:|
  Rat   333 GLSQDIRNQICFQLLRLCLRELFEFRFMQTDPNWANFLYDASSHKVTLLDFGASRAFGTEFTDHY 397

  Fly   541 RRVIMSAAENNRQGVLEMSREMGFLTGYETKQMEQAHVDAVMILGEIFRYDGDFDFGRQNTTERL 605
            ..|:.:||:.:|..||:.|:::.||||:|||....|||:|||||||.|...|.:|||...|..|:
  Rat   398 IEVVKAAADGDRDRVLQKSQDLKFLTGFETKAFSDAHVEAVMILGEPFAASGSYDFGAGETARRI 462

  Fly   606 AALVPTMVAHRLCPPPEEIYSIHRKLSGIFLLCARLNVRMNCVPFYKD 653
            ..|:|.::.|||.|||||.|::||||:|.||.||||:..:.|...::|
  Rat   463 QGLIPVLLRHRLRPPPEETYALHRKLAGAFLACARLHAHIACRDLFQD 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq8NP_572836.1 AarF 262..641 CDD:223733 201/380 (53%)
ABC1_ADCK3 313..563 CDD:270872 123/249 (49%)
Coq8bNP_001012065.1 KxGQ motif. /evidence=ECO:0000250|UniProtKB:Q8NI60 151..154 2/2 (100%)
ABC1_ADCK3 171..420 CDD:270872 123/248 (50%)
AAAS motif. /evidence=ECO:0000250|UniProtKB:Q8NI60 212..215 2/2 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166343819
Domainoid 1 1.000 217 1.000 Domainoid score I2598
eggNOG 1 0.900 - - E1_COG0661
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H86731
Inparanoid 1 1.050 473 1.000 Inparanoid score I1443
OMA 1 1.010 - - QHG53666
OrthoDB 1 1.010 - - D128317at33208
OrthoFinder 1 1.000 - - FOG0001764
OrthoInspector 1 1.000 - - otm44424
orthoMCL 1 0.900 - - OOG6_101512
Panther 1 1.100 - - LDO PTHR43851
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1120
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.810

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