DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq8 and D2023.6

DIOPT Version :9

Sequence 1:NP_572836.1 Gene:Coq8 / 32239 FlyBaseID:FBgn0052649 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_505980.1 Gene:D2023.6 / 179618 WormBaseID:WBGene00008410 Length:512 Species:Caenorhabditis elegans


Alignment Length:504 Identity:113/504 - (22%)
Similarity:210/504 - (41%) Gaps:110/504 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 LSKVAKQRKVPSSRIGRMASFGGLFAGLGLGTLNELTKGALGLGGSTSMREALLSPA-------- 276
            :..|...|::...|.||.||                |.|.:.:...||:| .|..|:        
 Worm    31 VDSVEDLRQLGLLRFGRAAS----------------TVGKIVIDYKTSLR-GLPEPSSEYDDAIK 78

  Fly   277 -----NAERIVDTLCKVRGAALKIGQILSIQDSSVVSPQLAKAFERVRQAADYMPDWQVERVMNT 336
                 :||.:::..|...|..:|:||.:|..: .::.|:..:....:...|.......|..|:.:
 Worm    79 KCHQRSAEHLLELACVNGGVFIKVGQHISGME-YLIPPEYTQTLSILTSQAPQASKEDVIYVVES 142

  Fly   337 QLGADWRQRLKSFEDKPFAAASIGQVHRATLSD-GMDVAIKIQYPGVAQSIESDIDNLVGMLKVW 400
            :|.|........|.:||..|||:.|||:|.|.: |..||:|:|:..|.::..:|::.:..::||.
 Worm   143 ELNAKVGDLFSEFSEKPVGAASLAQVHKAKLKESGETVAVKVQHKRVYKNSRTDVNTMEFLVKVA 207

  Fly   401 D-VFPQGFFIDNVVRVAKRELQWEVDYDREAEYTEKFREMIAPYPEYYVPRVVRDLTTSSVLTTE 464
            | |||: |.:..:|...|:.|..|:|:..||:..::..:.........:|::..||||:.|||.|
 Worm   208 DAVFPE-FRLMWLVDEIKKNLPNELDFLHEAKNADEAAQRFKHLKFLRIPKIKYDLTTTRVLTME 271

  Fly   465 LVPGVPLDKCFDLSYEHRRHI-----AASVLKLCLRELFEIECMQTDPNWSNFLYDAPSR---RL 521
            ...|..:|   |:.|..:.:|     ...:.|.....:|....:.:||:..|.|.::...   .:
 Worm   272 FCEGAHVD---DVEYLKKNNIDPHDVCMKIGKTISEMIFLQGYLHSDPHPGNVLINSLGNGKYEI 333

  Fly   522 MLIDFGSTRFYRH--EFIRN-YRRVIMSAAENNRQGVLEMSREMGFLTGYETKQMEQAHVDAVMI 583
            :|:|.|   .|.:  :.||. |..:.::..:.:.|.:.:::.:||                    
 Worm   334 VLLDHG---LYLNISDHIRKLYSDLWLAILKPDLQEIRKVASQMG-------------------- 375

  Fly   584 LGEIF-------------RYDGDFDFGRQNTTER------LAALVPTMVAHRLCPPPEEIY---- 625
            :||::             ...|.....:.|.:|:      .::|:| .::..|...|.|:.    
 Worm   376 VGELYGLFACMVTRRSWKSVTGGIGKSKMNESEKDELRMYASSLIP-QISEVLARMPREMLLILK 439

  Fly   626 ------SIHRKLSGIF------LLCARLNVRM--NCVPFYKDIVLGKFK 660
                  :|..|| |:|      :..:|..:|.  :......|.:|||||
 Worm   440 TNDLMRNIEHKL-GVFGSSDGHIEMSRCVIRSSHDLAIRRSDSLLGKFK 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq8NP_572836.1 AarF 262..641 CDD:223733 96/439 (22%)
ABC1_ADCK3 313..563 CDD:270872 65/262 (25%)
D2023.6NP_505980.1 ADCK1-like 123..375 CDD:270871 65/258 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0661
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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