DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq8 and coq-8

DIOPT Version :9

Sequence 1:NP_572836.1 Gene:Coq8 / 32239 FlyBaseID:FBgn0052649 Length:661 Species:Drosophila melanogaster
Sequence 2:NP_498014.2 Gene:coq-8 / 175647 WormBaseID:WBGene00000767 Length:755 Species:Caenorhabditis elegans


Alignment Length:635 Identity:270/635 - (42%)
Similarity:377/635 - (59%) Gaps:59/635 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 TVKETGERGY------VVAKGICSLLETKIKMSREESAISEPAQVSSIRK------STPTAQ--N 121
            ||.|||||.|      |.:..:.:|:.|..|:|:...::: |..:.:|.|      :.||||  .
 Worm   113 TVSETGERKYMKQTSPVQSNIVANLMATADKLSKGVISLA-PFPLPTITKLGTWVIANPTAQLPI 176

  Fly   122 PASWDAANLDISSI-TLQEFEEILSRRNKDRSVSLRTPAT-----KSNQTMPKKET--------S 172
            |....:|...|..| ||  .:.||..:....||| |.|..     .::|.:.:.||        .
 Worm   177 PPQLKSAIPAIGQIETL--IQSILGVQGPVSSVS-RAPRKLKLEGVTDQVVLEPETIHATVDVEP 238

  Fly   173 TNPGIITQDTEYVNNVLRFVAGAKVEEQPPDAQPKKKSDQPAIEVPELSK--------------- 222
            .:..:..::.|::....|.|.....|......|..|    |.:..|||.|               
 Worm   239 IDKTLTKEEAEFLIKAARSVDDDNAETAIFGTQKAK----PKVYRPELPKNFEVNLEMGNVHTLT 299

  Fly   223 VAKQRKVPSSRIGRMASFGGLFAGLGLGTLNELTKGALGLGGSTS----MREALLSPANAERIVD 283
            .:.:..||::||||:|:||.|..||..|...|:|:...|:|....    .:...||.|||:|||.
 Worm   300 RSNESSVPATRIGRLATFGQLAFGLLGGATAEVTRRTFGIGKRLQEEGIPKNPFLSEANADRIVA 364

  Fly   284 TLCKVRGAALKIGQILSIQDSSVVSPQLAKAFERVRQAADYMPDWQVERVMNTQLGADWRQRLKS 348
            |||:|||||||:||:|||||||.|.|.|.:.||||||:||:||..||.|.|....|.|||::.:.
 Worm   365 TLCRVRGAALKLGQMLSIQDSSTVPPALLQIFERVRQSADFMPIKQVHRQMKDAFGDDWREKFEH 429

  Fly   349 FEDKPFAAASIGQVHRATLSDGMDVAIKIQYPGVAQSIESDIDNLVGMLKVWDVFPQGFFIDNVV 413
            |:|||||.|||||||:|.|.||.:||:|:||||||:.|:|||||||.:|.|..:||:|.|:|..|
 Worm   430 FDDKPFACASIGQVHKAVLKDGRNVAVKVQYPGVAEGIDSDIDNLVSVLSVGGIFPKGMFLDAFV 494

  Fly   414 RVAKRELQWEVDYDREAEYTEKFREMIAPYPEYYVPRVVRDLTTSSVLTTELVPGVPLDKCFDLS 478
            .||:|||:.|.||:|||...:||||:||.:.:.|||.|:.:|::|.|||||||.|.|:|.|.:..
 Worm   495 GVARRELKQECDYEREARAMKKFRELIADWQDVYVPEVIDELSSSRVLTTELVYGKPVDACVEEP 559

  Fly   479 YEHRRHIAASVLKLCLRELFEIECMQTDPNWSNFLYDAPSR----RLMLIDFGSTRFYRHEFIRN 539
            ...|.:||...::|||:|:|....||||||||||......:    ||:|:|||::|.|..:|:..
 Worm   560 QVVRDYIAGKFIELCLKEIFLWRFMQTDPNWSNFFLGKHPKTGEPRLVLLDFGASRAYGKKFVDI 624

  Fly   540 YRRVIMSAAENNRQGVLEMSREMGFLTGYETKQMEQAHVDAVMILGEIFRYDGDFDFGRQNTTER 604
            |..:|.||.:.:::.::|.|||:||||||||..||.|||::|||:||....:..::|..|:.|.|
 Worm   625 YMNIIKSAYDGDKKKIIEYSREIGFLTGYETSVMEDAHVESVMIMGETLASNHPYNFANQDVTMR 689

  Fly   605 LAALVPTMVAHRLCPPPEEIYSIHRKLSGIFLLCARLNVRMNCVPFYKDI 654
            :..|:|.|:.|||..|||||||:||||||.:||.|:|...::|...:.:|
 Worm   690 IQKLIPVMLEHRLTSPPEEIYSLHRKLSGCYLLAAKLKATVSCGGLFHEI 739

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq8NP_572836.1 AarF 262..641 CDD:223733 204/386 (53%)
ABC1_ADCK3 313..563 CDD:270872 129/253 (51%)
coq-8NP_498014.2 AarF 298..>707 CDD:223733 205/408 (50%)
ABC1_ADCK3 394..648 CDD:270872 129/253 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160159646
Domainoid 1 1.000 192 1.000 Domainoid score I1891
eggNOG 1 0.900 - - E1_COG0661
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 441 1.000 Inparanoid score I930
Isobase 1 0.950 - 0 Normalized mean entropy S962
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D128317at33208
OrthoFinder 1 1.000 - - FOG0001764
OrthoInspector 1 1.000 - - oto20043
orthoMCL 1 0.900 - - OOG6_101512
Panther 1 1.100 - - LDO PTHR43851
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R9
SonicParanoid 1 1.000 - - X1120
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.740

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