DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq8 and coq8a

DIOPT Version :9

Sequence 1:NP_572836.1 Gene:Coq8 / 32239 FlyBaseID:FBgn0052649 Length:661 Species:Drosophila melanogaster
Sequence 2:XP_031757718.1 Gene:coq8a / 100379679 XenbaseID:XB-GENE-946116 Length:644 Species:Xenopus tropicalis


Alignment Length:687 Identity:284/687 - (41%)
Similarity:402/687 - (58%) Gaps:94/687 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 AQEAAALLRGLRILLEA-------------CGREHLAHGRHLWSNSSIRELIAENVAHTQQLVRS 56
            |.:|..|:|||..|.:|             .|...:...|. |           .||..::.  |
 Frog     3 AGDALMLMRGLAKLSKAVLEVQAGQLRQPTLGVNGIGFARS-W-----------QVAVEERF--S 53

  Fly    57 SSQNPTEELKKLQQTVKETGERGYVVAKGICSLLETKIKMSREESAISEPA-QVSSIRKSTPTAQ 120
            ::....:||.|.|:.:  .|:.           :||       |.:.|.|| :::.:..|..::|
 Frog    54 AAMGKMQELGKQQENL--AGQD-----------MET-------EYSFSGPASEIAGMEYSPSSSQ 98

  Fly   121 ----NPASWDAANLDISSITLQEFEEI------LSRRN-------KDRSVSLRTPATKSNQTMPK 168
                :.:..||.|:|.|..:..:.:..      ..|.|       :||:...   |....:....
 Frog    99 TQELHRSEADAQNMDTSYRSQGQTDSTFHPDPSFERDNGALFGDVRDRAGPF---AAYGQKRAFH 160

  Fly   169 KETSTNPGIITQDTEYVNNVLRFVAGAKVEEQPPDAQPKKKSDQPAIEVPELSKVAKQRKVPSSR 233
            ::.|:..|:..:|          :..|:..:..|..:|.|:.         ||..|::||||.:|
 Frog   161 QDHSSVSGLTAED----------IDKAREAKNNPANKPHKQM---------LSDRARERKVPVTR 206

  Fly   234 IGRMASFGGLFAGLGLGTLNELTKGAL------GLGGSTSMREA-LLSPANAERIVDTLCKVRGA 291
            |||:|:||||..|||:|.|.|:.|.:|      |.|..:.|..: .||.|||||||.||||||||
 Frog   207 IGRLANFGGLAVGLGIGALAEVAKKSLSPKPDNGSGKKSVMDSSPFLSEANAERIVRTLCKVRGA 271

  Fly   292 ALKIGQILSIQDSSVVSPQLAKAFERVRQAADYMPDWQVERVMNTQLGADWRQRLKSFEDKPFAA 356
            |||:||:|||||.|.::|||.|.||||||:||:||..|:.:.:|..||.:||.:|:|||::||||
 Frog   272 ALKLGQMLSIQDDSFINPQLQKVFERVRQSADFMPIKQMMKTLNNDLGPNWRDKLESFEERPFAA 336

  Fly   357 ASIGQVHRATLSDGMDVAIKIQYPGVAQSIESDIDNLVGMLKVWDVFPQGFFIDNVVRVAKRELQ 421
            |||||||.|.|.||.:||:|||||||||||.||::||:.:|.:.:..|:|.|.::::.|..|||.
 Frog   337 ASIGQVHLARLKDGREVAMKIQYPGVAQSIHSDVNNLMTVLNMSNALPEGLFPEHLIEVLSRELA 401

  Fly   422 WEVDYDREAEYTEKFREMIAPYPEYYVPRVVRDLTTSSVLTTELVPGVPLDKCFDLSYEHRRHIA 486
            .|.||.|||:..:||:|::..:|.:|||.|:.:|.:..|||||||.|.|||:...||.|.|..|.
 Frog   402 LECDYKREADCCKKFKELLQDHPFFYVPGVIDELCSGHVLTTELVSGFPLDQAEGLSQETRNEIC 466

  Fly   487 ASVLKLCLRELFEIECMQTDPNWSNFLYDAPSRRLMLIDFGSTRFYRHEFIRNYRRVIMSAAENN 551
            .::|.||||||||...||||||||||.||....::.|:|||:||.:..||...|..||.:||:.:
 Frog   467 YNILVLCLRELFEFRFMQTDPNWSNFFYDPQQNKVALLDFGATRGFDEEFTDMYIEVIRAAADQD 531

  Fly   552 RQGVLEMSREMGFLTGYETKQMEQAHVDAVMILGEIFRYDGDFDFGRQNTTERLAALVPTMVAHR 616
            |:.:|..|.||.||:|||:|.|||||::||:||||.|..|..||||.|:||||:..|||.|:.||
 Frog   532 REKLLRKSVEMKFLSGYESKAMEQAHLEAVLILGEAFAADSPFDFGSQSTTERIHRLVPIMLKHR 596

  Fly   617 LCPPPEEIYSIHRKLSGIFLLCARLNVRMNCVPFYKD 653
            |.|||||.||:|||::|.||:|::|...::|...:::
 Frog   597 LIPPPEETYSLHRKMAGSFLICSKLKSAISCKDMFEE 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq8NP_572836.1 AarF 262..641 CDD:223733 213/379 (56%)
ABC1_ADCK3 313..563 CDD:270872 130/249 (52%)
coq8aXP_031757718.1 ABC1_ADCK3 293..543 CDD:270872 130/249 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 221 1.000 Domainoid score I2557
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 474 1.000 Inparanoid score I1457
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D128317at33208
OrthoFinder 1 1.000 - - FOG0001764
OrthoInspector 1 1.000 - - otm47472
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R9
SonicParanoid 1 1.000 - - X1120
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.090

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