DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep6 and Nep3

DIOPT Version :9

Sequence 1:NP_001245645.1 Gene:Nep6 / 32234 FlyBaseID:FBgn0030425 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001245775.1 Gene:Nep3 / 33005 FlyBaseID:FBgn0031081 Length:786 Species:Drosophila melanogaster


Alignment Length:708 Identity:175/708 - (24%)
Similarity:298/708 - (42%) Gaps:130/708 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 DAEVKPCENFHQYACGNWYSNTSQRILGAHDMRSKWVANLKLQ-----LIRYLEESSSTDSFSAN 96
            |..|.||::|:.|:|..|..|..     ..:.:|.|....||:     :||.:.|..: .||.::
  Fly   120 DVTVDPCDDFYGYSCNQWIKNNP-----IPEGKSTWGTFGKLEQMNQLIIRNVLEKPA-KSFKSD 178

  Fly    97 TSVTTSTAQLGTLYRCCLLSGQSI-----RTYTDAL--------SRSGANFPLLANHTGGSFDWV 148
                 :..:....|..||.:.:.:     :...|.|        ::||.|   :||.|.|....:
  Fly   179 -----AERKAKVYYESCLDADEHMEKLGAKPMNDLLLQIGGWNVTKSGYN---VANWTMGHTLKI 235

  Fly   149 LANAALRTYGAQGLWRLLVKDNWQSADQRIFYM------LPPKFDLLGRDDE----LNEFLYQRY 203
            |.|    .|....|:...:.::.:::.:.:..:      ||.......:.|.    |||::  .|
  Fly   236 LHN----KYNFNCLFGWAIGEDDKNSSRHVIQIDQGGLTLPTADYYNNKTDNHRKVLNEYI--EY 294

  Fly   204 LKILLLELGLRVRRAALLAEKLVAFEKSLQKL-LP-NDAEQTLVLRKPQSLKDLESQLPRLELKR 266
            :..:.:.||.....|......::.|||.|..: :| .|......:..|..|:.|....|.|....
  Fly   295 MTKVCVLLGANESDARAQMIGVINFEKKLANITIPLEDRRNEEAMYHPMQLRQLSKLAPFLNWTD 359

  Fly   267 YFETILEGID---WDSKTLLLVADLDYLQGLQRLL--AEHTSD-PMVLSTWLLLQL--------- 316
            :|:..::.:.   .|.:.:::.|. |:|:.|..::  .|.|.: .:.|:.:|:.|.         
  Fly   360 HFDNAMQMVGRRVTDDEVVVVYAP-DFLKNLSDIILKMEQTEEGKITLNNYLVWQAVRTLTSCLS 423

  Fly   317 ----PAYFELR--LHDDDKLGNQR--NHCLEQLRKLMPGQLGRLQM-QLVLGESYQDVYDTAIQQ 372
                .||..:|  |...|  |.:.  .:|:.....::...:|.:.: |...|||    ...|.|.
  Fly   424 KPFRDAYKGVRKALMGSD--GGEEIWRYCVSDTNNVVGFAVGAIFVRQAFHGES----KPAAEQM 482

  Fly   373 IAVLFRDLKQQFELVL-NETEVFNEDLVTRNLARDK---LRAMRLLTPRLQDPINGGPGTPQLGG 433
            ||    ::::.|::.| |.|.|   |..||..|.:|   :..|......:.||:.......:|..
  Fly   483 IA----EIREAFKMNLQNLTWV---DKQTREKAIEKANQISDMIGFPDYILDPVELDKKYAELNI 540

  Fly   434 NCDA---NLLQLSLSQAKLEYRQVFGEPV--TSVPADPLSVNAYYRLKLNRIELPLGLMATPLIQ 493
            ..:|   |.:|:::...|...::: .:||  |:....|.:|||||....|:|..|.|::.||...
  Fly   541 TPNAYFENNIQVAIYNLKSNLKRL-DQPVNKTNWGMTPQTVNAYYTPTKNQIVFPAGILQTPFFD 604

  Fly   494 QQCSKEADTRAKLSAGLGYILAHEMVHAFDLDGLNYDATGQLANGQWSARAIIRFGLRAGC---- 554
            ....|..:..|     :|.::.||:.||||..|..||..|.: |..|.:::|.||..::.|    
  Fly   605 INNPKSLNFGA-----MGVVMGHELTHAFDDQGREYDKFGNI-NRWWDSKSIERFNEKSECIARQ 663

  Fly   555 YLGVRYSNATL----TVNENIADTEGLRLALDTYRHRS-------------GATNLRTFFVAFAQ 602
            |.|.:.:..||    |:.|||||..||:.|...|:...             ..|:.:.|||:|||
  Fly   664 YSGYKMNGRTLNGKQTLGENIADNGGLKAAYHAYQRTKSDRDVDILKLPGLNLTHSQLFFVSFAQ 728

  Fly   603 NWCGTVASTSGLSQ-----HAGHAERVNNVVGNMPEFGDTFECKATSQMNPVNKCHIW 655
            .||.:....:.|.|     |:....||...:.||.||.:.|:||...:|||..||.:|
  Fly   729 VWCSSTTDETNLLQMEKDPHSPSQFRVIGTLSNMKEFAEVFQCKPGKRMNPTEKCEVW 786

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep6NP_001245645.1 PepO 35..655 CDD:226118 174/706 (25%)
M13 40..653 CDD:189000 172/701 (25%)
Nep3NP_001245775.1 M13 123..784 CDD:189000 172/701 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45454935
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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