DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep6 and nep-2

DIOPT Version :10

Sequence 1:NP_572831.2 Gene:Nep6 / 32234 FlyBaseID:FBgn0030425 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_494343.2 Gene:nep-2 / 188090 WormBaseID:WBGene00020230 Length:736 Species:Caenorhabditis elegans


Alignment Length:774 Identity:177/774 - (22%)
Similarity:308/774 - (39%) Gaps:168/774 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KPPLSSITRL-----VVILGVMLLKLAAA----------------QDCQQQLD---NDTDAEVKP 42
            |.|.|..||:     :::|.:.||.|.||                ..|.:...   :..::.|.|
 Worm    11 KSPGSRWTRIWAIIALILLILFLLVLGAAIYFYINYKDSSDVCLSPGCIKTASVILSSMNSSVDP 75

  Fly    43 CENFHQYACGNW---------------YSNTSQRILGAHDMRSKWVANLKLQLIRYLEESSSTDS 92
            |::|:::|||.|               :.|..|              :|:..|...|:|:.....
 Worm    76 CDDFYEFACGQWIKGHPIPDDAPSVSNFENLGQ--------------DLEFALKELLDENDEPYD 126

  Fly    93 FSANTSVTTSTAQLGTLYRCCLLSGQSI---RTYTDALSRSGANFPLLANH--TGGSFDWVLANA 152
            :.     |::..:....|..||...:.:   ||..|.:.:|...:|.|.:.  ...|.:.:.|:.
 Worm   127 YE-----TSAVGKAKYFYNLCLNESEILDNWRTTFDEVVKSFGGWPSLGHQMKPDASIEMLYADM 186

  Fly   153 ALRTYGAQGLWRLLVKDNWQSADQRIFYMLPPKFDLLGRD-----DELNEFLYQRYLKILLLELG 212
            ..: :.|..|::..|:.:.:::.:.:..:..|:.:|..||     :......|.:.::.:|:.|.
 Worm   187 VAK-FKADSLFKATVQPDDKNSQRHVLLIDQPQLNLFARDFYVAAENEERMAYLQLIRDVLILLD 250

  Fly   213 LRVRRAALLAEKLVAFEKSLQKLLPNDAEQTLV--LRKPQSLKDLESQLPRLELKRYFETILEG- 274
            ....||.|.|::::.||.:|..:...|..:..:  |....:|.::...||......:|..:.:. 
 Worm   251 ADRTRATLDAKEIIDFETALANITMADEHRHDIAELYTKITLGEMRRSLPHFNWPLFFNRMFKDL 315

  Fly   275 -------IDWDSKTLLLVADLDYLQGLQRLLAEHTSDPMV-LSTW------LLLQLPAYFELRLH 325
                   |.:|..|.::|...::|:.|..|:.::.:..:| ...|      :|..||..|.|.:.
 Worm   316 HEKNGKRITFDDNTEVVVYGYEFLRRLDVLIPQYDNRLIVNYLEWCWFFKTMLRDLPDPFALTIF 380

  Fly   326 DDDKLGNQRN------H-CLEQLRKLMPGQLGRLQMQLVLGESYQDVYDTAIQQIAVLFRDLKQQ 383
            ...|..|..|      | |:.::..|||     :....:..:::.|  ..|.||:..:...:.:.
 Worm   381 KFYKTLNIMNVQKVRWHGCVTRINSLMP-----MATSAIYVKNHFD--HEAKQQVEEMISLIMES 438

  Fly   384 F-ELVLNETEVFNEDLVTRNLARDKLRAMRL---LTPRLQDP--INGG-------PGTPQLGGNC 435
            | :|:|:|..:..|   |:..|:.|:..|:.   ....|.||  :|..       ||        
 Worm   439 FVDLLLSEDWLTKE---TKQTAKQKVNEMKRKIGYPDYLNDPAAVNNEYKTFKVYPG-------- 492

  Fly   436 DANLLQLSLSQAKLEYRQVFGEPVTSV------PADPLSVNAYYRLKLNRIELPLGLMATPLIQQ 494
              :..|...|..:...|.|. |.:|..      .|....|||:|....|.|..|.|:: .|:.. 
 Worm   493 --HYYQTKFSFYEQYQRDVL-ERITEAVDRERWVAGAALVNAFYSPNTNEIIFPAGIL-QPVFY- 552

  Fly   495 QCSKEADTRAKLSAGLGYILAHEMVHAFDLDGLNYDATGQLANGQWSARAIIRFGLRAGCYLGVR 559
              ||:..:.... .|:|.::.||:.|.||..|..||..|.:.. .|....|.:|..:|.| :..:
 Worm   553 --SKDFPSSMNF-GGIGVVIGHEITHGFDDRGRLYDNLGNIRQ-WWDNATISKFEHKAQC-IEKQ 612

  Fly   560 YS-----------NATLTVNENIADTEGLRLALDTY-----RH----RSGATNL---RTFFVAFA 601
            ||           |...|..|||||..||:.|...|     ||    |....||   :.||:.:|
 Worm   613 YSSYVLDQINMQINGKSTKGENIADNGGLKQAYRAYKKYEKRHSRPPRLPGVNLTHDQLFFLNYA 677

  Fly   602 QNWCGTVASTSGL-----SQHAGHAERVNNVVGNMPEFGDTFECKATSQMNPVNKCHIW 655
            |.||||:.....:     |:|:....||...:.|..:|...:.|:..|||||..||.:|
 Worm   678 QIWCGTMNDKEAIRKLRTSEHSPGPIRVKGPLSNSYDFAKAYNCEPGSQMNPREKCRVW 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep6NP_572831.2 M13 40..653 CDD:341056 163/708 (23%)
nep-2NP_494343.2 M13 73..734 CDD:341056 163/708 (23%)

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