DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep6 and nep-2

DIOPT Version :9

Sequence 1:NP_001245645.1 Gene:Nep6 / 32234 FlyBaseID:FBgn0030425 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_494343.2 Gene:nep-2 / 188090 WormBaseID:WBGene00020230 Length:736 Species:Caenorhabditis elegans


Alignment Length:774 Identity:177/774 - (22%)
Similarity:308/774 - (39%) Gaps:168/774 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KPPLSSITRL-----VVILGVMLLKLAAA----------------QDCQQQLD---NDTDAEVKP 42
            |.|.|..||:     :::|.:.||.|.||                ..|.:...   :..::.|.|
 Worm    11 KSPGSRWTRIWAIIALILLILFLLVLGAAIYFYINYKDSSDVCLSPGCIKTASVILSSMNSSVDP 75

  Fly    43 CENFHQYACGNW---------------YSNTSQRILGAHDMRSKWVANLKLQLIRYLEESSSTDS 92
            |::|:::|||.|               :.|..|              :|:..|...|:|:.....
 Worm    76 CDDFYEFACGQWIKGHPIPDDAPSVSNFENLGQ--------------DLEFALKELLDENDEPYD 126

  Fly    93 FSANTSVTTSTAQLGTLYRCCLLSGQSI---RTYTDALSRSGANFPLLANH--TGGSFDWVLANA 152
            :.     |::..:....|..||...:.:   ||..|.:.:|...:|.|.:.  ...|.:.:.|:.
 Worm   127 YE-----TSAVGKAKYFYNLCLNESEILDNWRTTFDEVVKSFGGWPSLGHQMKPDASIEMLYADM 186

  Fly   153 ALRTYGAQGLWRLLVKDNWQSADQRIFYMLPPKFDLLGRD-----DELNEFLYQRYLKILLLELG 212
            ..: :.|..|::..|:.:.:::.:.:..:..|:.:|..||     :......|.:.::.:|:.|.
 Worm   187 VAK-FKADSLFKATVQPDDKNSQRHVLLIDQPQLNLFARDFYVAAENEERMAYLQLIRDVLILLD 250

  Fly   213 LRVRRAALLAEKLVAFEKSLQKLLPNDAEQTLV--LRKPQSLKDLESQLPRLELKRYFETILEG- 274
            ....||.|.|::::.||.:|..:...|..:..:  |....:|.::...||......:|..:.:. 
 Worm   251 ADRTRATLDAKEIIDFETALANITMADEHRHDIAELYTKITLGEMRRSLPHFNWPLFFNRMFKDL 315

  Fly   275 -------IDWDSKTLLLVADLDYLQGLQRLLAEHTSDPMV-LSTW------LLLQLPAYFELRLH 325
                   |.:|..|.::|...::|:.|..|:.::.:..:| ...|      :|..||..|.|.:.
 Worm   316 HEKNGKRITFDDNTEVVVYGYEFLRRLDVLIPQYDNRLIVNYLEWCWFFKTMLRDLPDPFALTIF 380

  Fly   326 DDDKLGNQRN------H-CLEQLRKLMPGQLGRLQMQLVLGESYQDVYDTAIQQIAVLFRDLKQQ 383
            ...|..|..|      | |:.::..|||     :....:..:::.|  ..|.||:..:...:.:.
 Worm   381 KFYKTLNIMNVQKVRWHGCVTRINSLMP-----MATSAIYVKNHFD--HEAKQQVEEMISLIMES 438

  Fly   384 F-ELVLNETEVFNEDLVTRNLARDKLRAMRL---LTPRLQDP--INGG-------PGTPQLGGNC 435
            | :|:|:|..:..|   |:..|:.|:..|:.   ....|.||  :|..       ||        
 Worm   439 FVDLLLSEDWLTKE---TKQTAKQKVNEMKRKIGYPDYLNDPAAVNNEYKTFKVYPG-------- 492

  Fly   436 DANLLQLSLSQAKLEYRQVFGEPVTSV------PADPLSVNAYYRLKLNRIELPLGLMATPLIQQ 494
              :..|...|..:...|.|. |.:|..      .|....|||:|....|.|..|.|:: .|:.. 
 Worm   493 --HYYQTKFSFYEQYQRDVL-ERITEAVDRERWVAGAALVNAFYSPNTNEIIFPAGIL-QPVFY- 552

  Fly   495 QCSKEADTRAKLSAGLGYILAHEMVHAFDLDGLNYDATGQLANGQWSARAIIRFGLRAGCYLGVR 559
              ||:..:.... .|:|.::.||:.|.||..|..||..|.:.. .|....|.:|..:|.| :..:
 Worm   553 --SKDFPSSMNF-GGIGVVIGHEITHGFDDRGRLYDNLGNIRQ-WWDNATISKFEHKAQC-IEKQ 612

  Fly   560 YS-----------NATLTVNENIADTEGLRLALDTY-----RH----RSGATNL---RTFFVAFA 601
            ||           |...|..|||||..||:.|...|     ||    |....||   :.||:.:|
 Worm   613 YSSYVLDQINMQINGKSTKGENIADNGGLKQAYRAYKKYEKRHSRPPRLPGVNLTHDQLFFLNYA 677

  Fly   602 QNWCGTVASTSGL-----SQHAGHAERVNNVVGNMPEFGDTFECKATSQMNPVNKCHIW 655
            |.||||:.....:     |:|:....||...:.|..:|...:.|:..|||||..||.:|
 Worm   678 QIWCGTMNDKEAIRKLRTSEHSPGPIRVKGPLSNSYDFAKAYNCEPGSQMNPREKCRVW 736

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep6NP_001245645.1 PepO 35..655 CDD:226118 164/715 (23%)
M13 40..653 CDD:189000 163/708 (23%)
nep-2NP_494343.2 PepO 61..736 CDD:226118 164/722 (23%)
M13 73..734 CDD:189000 163/708 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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