DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep6 and F41C6.4

DIOPT Version :9

Sequence 1:NP_001245645.1 Gene:Nep6 / 32234 FlyBaseID:FBgn0030425 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001129930.1 Gene:F41C6.4 / 185599 WormBaseID:WBGene00018278 Length:393 Species:Caenorhabditis elegans


Alignment Length:347 Identity:70/347 - (20%)
Similarity:111/347 - (31%) Gaps:122/347 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 EKSLQKLLPNDAEQTLVLRKPQSLKDLESQLPRLELKRYFETILEGIDWDSKTLLLVADLDYLQG 293
            |::|..:.|.:.|.                    |:..|||.:.               ||..| 
 Worm    79 EEALNNIKPGEIEN--------------------EISAYFERVF---------------LDMCQ- 107

  Fly   294 LQRLLAEHTSDPMVLSTWLLLQLPAYFE-----------LRLHDDDKLGNQRN------------ 335
                    .:||.:.:..|..|.....|           |||..|.......|            
 Worm   108 --------NNDPAMTTFLLRTQQMLSHEMSTKCRAENCLLRLGGDSNCTRAANDFKSRVAKKTDS 164

  Fly   336 -HCLEQLRKLMPGQLG----RLQMQLVLGESYQ-----------DVYDTAIQQIAVLFRDLKQQF 384
             |..|.:.||.....|    ...:.::|..:::           ::.|..:|.|.|.....|..|
 Worm   165 SHYQEYVLKLRENIAGWKNKTRAVNILLDGNFKVGVDNINSFLMNMVDVLLQWIQVYKYIAKNPF 229

  Fly   385 ELVLNETEVFNEDLVTRNL---ARDKLRAMRLLTPRLQDPINGGPGTPQLGGNCDANLL-QLSLS 445
            ||:|.||...|:..:.|.|   ||| |..:.....:|::.|:....|.|....|.|:.. :..|.
 Worm   230 ELILQETPWVNDQKINRALEAVARD-LFVIDEYGIQLRENIDALMKTEQDFLKCSADFSGKHDLF 293

  Fly   446 QAKLEYRQVFGEPVTSVPADPLSVNAYYRLKLNRIELPLGLMAT----------PLIQQQCSKEA 500
            .:...|..:|....|:|                   |..|..||          |.|    ::.|
 Worm   294 CSIYSYHFMFNGRTTTV-------------------LHFGYDATNRHPYIYFGMPFI----ARAA 335

  Fly   501 DTRAKLSAGL-GYILAHEMVHA 521
            ::....:.|| ||::.||:.|:
 Worm   336 NSEMAANLGLAGYVVGHELSHS 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep6NP_001245645.1 PepO 35..655 CDD:226118 70/347 (20%)
M13 40..653 CDD:189000 70/347 (20%)
F41C6.4NP_001129930.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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