DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nep6 and nep-8

DIOPT Version :9

Sequence 1:NP_001245645.1 Gene:Nep6 / 32234 FlyBaseID:FBgn0030425 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001309548.1 Gene:nep-8 / 184631 WormBaseID:WBGene00017553 Length:686 Species:Caenorhabditis elegans


Alignment Length:656 Identity:134/656 - (20%)
Similarity:241/656 - (36%) Gaps:195/656 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LAAAQDC---QQQLDNDTDAEVKPCENFHQYACGNWYSNTSQRILGAHDMRSKWVANLKLQLIRY 83
            |..:.:|   ..:|.|..|..|.||.:|.|::||.::   .|.:..:...:.|.:  |:.|:..:
 Worm    55 LCDSPECITLSHELLNYQDPSVDPCVDFFQHSCGRFH---EQSVSESRLQKKKHI--LRKQIREF 114

  Fly    84 LEESSSTDSFSANTSVTTSTAQLGTLYRCCLLSGQSIRTYTDALSRSGANFPLLANHTGGSFDWV 148
            |.:..::.|.|.|.        :..::..|..|.::          |..|:.:..:.....|:  
 Worm   115 LHKIQNSTSKSENL--------MKLVFDKCEASKKT----------SNDNYKISRDAIHDVFN-- 159

  Fly   149 LANAALRTYGAQGLWRLLVKDNWQSADQRIFYMLPPKFDLLGRDDELNEFLYQRYLKILLLELGL 213
                .::..||   |.||.| ||..:          |||       |||.| ...:|:....|||
 Worm   160 ----DIKKIGA---WPLLDK-NWDGS----------KFD-------LNEML-SNLVKLGATNLGL 198

  Fly   214 RVRRAALLAE-KLVAFEKSLQKLLPNDAEQTLVLRKPQSLKDLESQLPRLELKRYFETILE--GI 275
            ......:|.| |.|....:|..::.|....:::                       ..|||  |:
 Worm   199 FQLDFRILTEGKFVRIAPTLGSIVHNSTMISMI-----------------------SEILEANGV 240

  Fly   276 DWDSKTLLLVADLDYLQGLQRLLAEHTSDPMVLSTWLLLQLPAYFELRLHDDDKLGNQRNHCLEQ 340
            ..||:.  :..:.:....||..||::.|     |..|.:.||.   :|..:...|..:..|    
 Worm   241 QPDSEE--ISKEFEEYSSLQMKLAKYQS-----SGKLSISLPG---VRSINFSSLITEMIH---- 291

  Fly   341 LRKLMPGQLGRL--QMQLVLGE-------SYQDVYDTAIQQIA-------VLFRDLKQQFELVLN 389
                 |.::.::  ::::|..|       :..:..||.|:..:       ::|..::..:.::..
 Worm   292 -----PSRVSKIFGKIRVVTSEHPLFFKSNETESLDTIIESTSNKTLANFLIFNYIQSSYNIMKG 351

  Fly   390 ETEVFNEDLVTRNLARDKLR-------------AMRLLTPRL--------QDPINGGPGTPQLGG 433
            ......||.|.|...|..||             .::.||..|        ||..|..|...    
 Worm   352 ARRGNCEDDVRREFPRASLRVFMRNFVDKGNRDGVKKLTEELKKNTLEMIQDTENLAPPVK---- 412

  Fly   434 NCDANLLQLSLSQAKLEYRQVFGEPVT------SVPADPLSVNAYYRL--KLNRI--ELPLGLMA 488
              ::.|.::...:..:.|...|..|.|      :...|  |.::|||:  ||||:  |..:..:|
 Worm   413 --ESMLKKVEAIKVTIGYPDHFDPPGTLDKEFENFDLD--STDSYYRIFQKLNRLRSEQQMEFIA 473

  Fly   489 --TPL--IQQQCSKEADTRAKLSA------------------------GLGYILAHEMVHAFDLD 525
              ||:  |::.....|:.:...:|                        ..|:::|||:.|:.|.:
 Worm   474 GETPISPIKEVLKVNANYKRSKNALTVFAPFLDDPFFDITYPDYVNLFFSGFLIAHEIGHSVDAN 538

  Fly   526 GLNYDATGQLANGQWSARAIIRFGLRAGCYLGVRYS-----------NATLTVNENIADTEGLRL 579
            ||.||..|:..:| .....:..:|.:..|.:. :|.           |.|.::||.|||..|..:
 Worm   539 GLGYDENGKPMDG-IRLEHVTEYGKQGQCLVD-QYDNYDDPVYGKKMNGTHSINEIIADWVGHEV 601

  Fly   580 ALDTYR 585
            ....|:
 Worm   602 TWRAYK 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nep6NP_001245645.1 PepO 35..655 CDD:226118 130/640 (20%)
M13 40..653 CDD:189000 129/635 (20%)
nep-8NP_001309548.1 M13 76..664 CDD:341056 129/635 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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